RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 KRTAP19-3Q7Z4W3 81 aa7.95□□□□□ -1.14
MBD3-202ENST00000434436 KRTAP4-3Q9BYR4 195 aa7.91□□□□□ -1.14
MBD3-202ENST00000434436 MT1MQ8N339 61 aa7.9□□□□□ -1.15
MBD3-202ENST00000434436 MT1GP13640 62 aa7.89□□□□□ -1.15
MBD3-202ENST00000434436 SPRR2FQ96RM1 72 aa7.83□□□□□ -1.16
MBD3-202ENST00000434436 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
MBD3-202ENST00000434436 KRTAP2-3P0C7H8 128 aa7.82□□□□□ -1.16
MBD3-202ENST00000434436 KRTAP2-4Q9BYR9 128 aa7.82□□□□□ -1.16
MBD3-202ENST00000434436 KRTAP2-1Q9BYU5 128 aa7.82□□□□□ -1.16
MBD3-202ENST00000434436 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
MBD3-202ENST00000434436 MACF1Q9UPN3 7388 aaKnown RBP7.75□□□□□ -1.17
MBD3-202ENST00000434436 LCE5AQ5TCM9 118 aa7.74□□□□□ -1.17
MBD3-202ENST00000434436 INE1O15225 51 aa7.73□□□□□ -1.17
MBD3-202ENST00000434436 SYNE2Q8WXH0 6885 aaKnown RBP7.62□□□□□ -1.19
MBD3-202ENST00000434436 KRTAP5-9P26371 169 aa7.48□□□□□ -1.21
MBD3-202ENST00000434436 KRTAP9-6A0A140TA67 174 aa7.42□□□□□ -1.22
MBD3-202ENST00000434436 DSTQ03001 7570 aaKnown RBP7.4□□□□□ -1.22
MBD3-202ENST00000434436 LCE1AQ5T7P2 110 aa7.4□□□□□ -1.22
MBD3-202ENST00000434436 MDN1Q9NU22 5596 aa7.36□□□□□ -1.23
MBD3-202ENST00000434436 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
MBD3-202ENST00000434436 SPRR2EP22531 72 aa7.24□□□□□ -1.25
MBD3-202ENST00000434436 SPRR2BP35325 72 aa7.24□□□□□ -1.25
MBD3-202ENST00000434436 SPRR2AP35326 72 aa7.24□□□□□ -1.25
MBD3-202ENST00000434436 KRTAP6-1Q3LI64 71 aa7.08□□□□□ -1.28
MBD3-202ENST00000434436 KRTAP5-5Q701N2 237 aaPredicted RBP7.06□□□□□ -1.28
MBD3-202ENST00000434436 MT1AP04731 61 aa7.05□□□□□ -1.28
MBD3-202ENST00000434436 KRTAP6-3Q3LI67 103 aa7.03□□□□□ -1.28
MBD3-202ENST00000434436 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
MBD3-202ENST00000434436 SPRR2DP22532 72 aa6.95□□□□□ -1.3
MBD3-202ENST00000434436 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.32
MBD3-202ENST00000434436 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
MBD3-202ENST00000434436 KRTAP12-4P60329 112 aa6.78□□□□□ -1.32
MBD3-202ENST00000434436 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
MBD3-202ENST00000434436 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
MBD3-202ENST00000434436 NEBP20929 6669 aa6.62□□□□□ -1.35
MBD3-202ENST00000434436 LCE3DQ9BYE3 92 aa6.54□□□□□ -1.36
MBD3-202ENST00000434436 LCE3EQ5T5B0 92 aa6.42□□□□□ -1.38
MBD3-202ENST00000434436 KRTAP5-4Q6L8H1 288 aa6.4□□□□□ -1.38
MBD3-202ENST00000434436 KRTAP6-2Q3LI66 62 aa6.4□□□□□ -1.39
MBD3-202ENST00000434436 MT3P25713 68 aa6.33□□□□□ -1.4
MBD3-202ENST00000434436 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.43
MBD3-202ENST00000434436 MT4P47944 62 aa6.09□□□□□ -1.43
MBD3-202ENST00000434436 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
MBD3-202ENST00000434436 KRTAP20-1Q3LI63 56 aa6.02□□□□□ -1.45
MBD3-202ENST00000434436 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
MBD3-202ENST00000434436 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
MBD3-202ENST00000434436 PRM1P04553 51 aa5.95□□□□□ -1.46
MBD3-202ENST00000434436 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
MBD3-202ENST00000434436 KRTAP5-2Q701N4 177 aa5.92□□□□□ -1.46
MBD3-202ENST00000434436 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
MBD3-202ENST00000434436 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
MBD3-202ENST00000434436 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
MBD3-202ENST00000434436 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
MBD3-202ENST00000434436 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
MBD3-202ENST00000434436 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
MBD3-202ENST00000434436 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
MBD3-202ENST00000434436 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
MBD3-202ENST00000434436 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
MBD3-202ENST00000434436 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
MBD3-202ENST00000434436 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
MBD3-202ENST00000434436 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
MBD3-202ENST00000434436 KRTAP5-8O75690 187 aa4.85□□□□□ -1.63
MBD3-202ENST00000434436 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
MBD3-202ENST00000434436 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.66
MBD3-202ENST00000434436 KRTAP21-2Q3LI59 83 aa4.61□□□□□ -1.67
MBD3-202ENST00000434436 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
MBD3-202ENST00000434436 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.72
MBD3-202ENST00000434436 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
MBD3-202ENST00000434436 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
MBD3-202ENST00000434436 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.74
MBD3-202ENST00000434436 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
MBD3-202ENST00000434436 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
MBD3-202ENST00000434436 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
MBD3-202ENST00000434436 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
MBD3-202ENST00000434436 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
MBD3-202ENST00000434436 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
MBD3-202ENST00000434436 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 185.2 ms