RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 MT1LQ93083 61 aa4.18□□□□□ -1.74
SEMA3F-206ENST00000434342 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.75
SEMA3F-206ENST00000434342 KRTAP2-3P0C7H8 128 aa4.15□□□□□ -1.75
SEMA3F-206ENST00000434342 KRTAP2-4Q9BYR9 128 aa4.15□□□□□ -1.75
SEMA3F-206ENST00000434342 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
SEMA3F-206ENST00000434342 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
SEMA3F-206ENST00000434342 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
SEMA3F-206ENST00000434342 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
SEMA3F-206ENST00000434342 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
SEMA3F-206ENST00000434342 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
SEMA3F-206ENST00000434342 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
SEMA3F-206ENST00000434342 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
SEMA3F-206ENST00000434342 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
SEMA3F-206ENST00000434342 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
SEMA3F-206ENST00000434342 MT1GP13640 62 aa4□□□□□ -1.77
SEMA3F-206ENST00000434342 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
SEMA3F-206ENST00000434342 MT1MQ8N339 61 aa3.92□□□□□ -1.78
SEMA3F-206ENST00000434342 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
SEMA3F-206ENST00000434342 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
SEMA3F-206ENST00000434342 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
SEMA3F-206ENST00000434342 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
SEMA3F-206ENST00000434342 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
SEMA3F-206ENST00000434342 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
SEMA3F-206ENST00000434342 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
SEMA3F-206ENST00000434342 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
SEMA3F-206ENST00000434342 PRM1P04553 51 aa3.71□□□□□ -1.82
SEMA3F-206ENST00000434342 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
SEMA3F-206ENST00000434342 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
SEMA3F-206ENST00000434342 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
SEMA3F-206ENST00000434342 SPRR2EP22531 72 aa3.6□□□□□ -1.83
SEMA3F-206ENST00000434342 SPRR2BP35325 72 aa3.6□□□□□ -1.83
SEMA3F-206ENST00000434342 SPRR2AP35326 72 aa3.6□□□□□ -1.83
SEMA3F-206ENST00000434342 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
SEMA3F-206ENST00000434342 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
SEMA3F-206ENST00000434342 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
SEMA3F-206ENST00000434342 MT1AP04731 61 aa3.49□□□□□ -1.85
SEMA3F-206ENST00000434342 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
SEMA3F-206ENST00000434342 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
SEMA3F-206ENST00000434342 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
SEMA3F-206ENST00000434342 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
SEMA3F-206ENST00000434342 SPRR2DP22532 72 aa3.43□□□□□ -1.86
SEMA3F-206ENST00000434342 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
SEMA3F-206ENST00000434342 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
SEMA3F-206ENST00000434342 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
SEMA3F-206ENST00000434342 NEBP20929 6669 aa3.29□□□□□ -1.88
SEMA3F-206ENST00000434342 MT4P47944 62 aa3.28□□□□□ -1.88
SEMA3F-206ENST00000434342 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
SEMA3F-206ENST00000434342 MT3P25713 68 aa3.17□□□□□ -1.9
SEMA3F-206ENST00000434342 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
SEMA3F-206ENST00000434342 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
SEMA3F-206ENST00000434342 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
SEMA3F-206ENST00000434342 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
SEMA3F-206ENST00000434342 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
SEMA3F-206ENST00000434342 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
SEMA3F-206ENST00000434342 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
SEMA3F-206ENST00000434342 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
SEMA3F-206ENST00000434342 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
SEMA3F-206ENST00000434342 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
SEMA3F-206ENST00000434342 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
SEMA3F-206ENST00000434342 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
SEMA3F-206ENST00000434342 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
SEMA3F-206ENST00000434342 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
SEMA3F-206ENST00000434342 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
SEMA3F-206ENST00000434342 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
SEMA3F-206ENST00000434342 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
SEMA3F-206ENST00000434342 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
SEMA3F-206ENST00000434342 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
SEMA3F-206ENST00000434342 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
SEMA3F-206ENST00000434342 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
SEMA3F-206ENST00000434342 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SEMA3F-206ENST00000434342 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
SEMA3F-206ENST00000434342 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
SEMA3F-206ENST00000434342 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
SEMA3F-206ENST00000434342 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
SEMA3F-206ENST00000434342 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
SEMA3F-206ENST00000434342 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
SEMA3F-206ENST00000434342 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 104.3 ms