RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
TMCO3-202ENST00000434316 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
TMCO3-202ENST00000434316 MT1GP13640 62 aa4.83□□□□□ -1.64
TMCO3-202ENST00000434316 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
TMCO3-202ENST00000434316 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
TMCO3-202ENST00000434316 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
TMCO3-202ENST00000434316 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
TMCO3-202ENST00000434316 MT1MQ8N339 61 aa4.74□□□□□ -1.65
TMCO3-202ENST00000434316 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
TMCO3-202ENST00000434316 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
TMCO3-202ENST00000434316 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
TMCO3-202ENST00000434316 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
TMCO3-202ENST00000434316 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
TMCO3-202ENST00000434316 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
TMCO3-202ENST00000434316 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
TMCO3-202ENST00000434316 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
TMCO3-202ENST00000434316 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
TMCO3-202ENST00000434316 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
TMCO3-202ENST00000434316 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
TMCO3-202ENST00000434316 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
TMCO3-202ENST00000434316 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
TMCO3-202ENST00000434316 MT1AP04731 61 aa4.32□□□□□ -1.72
TMCO3-202ENST00000434316 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
TMCO3-202ENST00000434316 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
TMCO3-202ENST00000434316 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
TMCO3-202ENST00000434316 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
TMCO3-202ENST00000434316 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
TMCO3-202ENST00000434316 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
TMCO3-202ENST00000434316 PRM1P04553 51 aa4.16□□□□□ -1.74
TMCO3-202ENST00000434316 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
TMCO3-202ENST00000434316 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
TMCO3-202ENST00000434316 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
TMCO3-202ENST00000434316 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
TMCO3-202ENST00000434316 SPRR2EP22531 72 aa3.98□□□□□ -1.77
TMCO3-202ENST00000434316 SPRR2BP35325 72 aa3.98□□□□□ -1.77
TMCO3-202ENST00000434316 SPRR2AP35326 72 aa3.98□□□□□ -1.77
TMCO3-202ENST00000434316 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
TMCO3-202ENST00000434316 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
TMCO3-202ENST00000434316 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.77
TMCO3-202ENST00000434316 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
TMCO3-202ENST00000434316 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
TMCO3-202ENST00000434316 MT3P25713 68 aa3.8□□□□□ -1.8
TMCO3-202ENST00000434316 SPRR2DP22532 72 aa3.79□□□□□ -1.8
TMCO3-202ENST00000434316 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
TMCO3-202ENST00000434316 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
TMCO3-202ENST00000434316 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
TMCO3-202ENST00000434316 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
TMCO3-202ENST00000434316 NEBP20929 6669 aa3.48□□□□□ -1.85
TMCO3-202ENST00000434316 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
TMCO3-202ENST00000434316 MT4P47944 62 aa3.41□□□□□ -1.86
TMCO3-202ENST00000434316 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
TMCO3-202ENST00000434316 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
TMCO3-202ENST00000434316 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
TMCO3-202ENST00000434316 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
TMCO3-202ENST00000434316 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
TMCO3-202ENST00000434316 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
TMCO3-202ENST00000434316 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
TMCO3-202ENST00000434316 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
TMCO3-202ENST00000434316 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
TMCO3-202ENST00000434316 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
TMCO3-202ENST00000434316 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
TMCO3-202ENST00000434316 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
TMCO3-202ENST00000434316 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
TMCO3-202ENST00000434316 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
TMCO3-202ENST00000434316 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.97
TMCO3-202ENST00000434316 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
TMCO3-202ENST00000434316 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
TMCO3-202ENST00000434316 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
TMCO3-202ENST00000434316 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
TMCO3-202ENST00000434316 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
TMCO3-202ENST00000434316 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
TMCO3-202ENST00000434316 KRTAP5-8O75690 187 aa2.57□□□□□ -2
TMCO3-202ENST00000434316 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
TMCO3-202ENST00000434316 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
TMCO3-202ENST00000434316 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
TMCO3-202ENST00000434316 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
TMCO3-202ENST00000434316 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms