RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 TNP1P09430 55 aa3.75□□□□□ -1.81
HOXD3-203ENST00000432796 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
HOXD3-203ENST00000432796 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
HOXD3-203ENST00000432796 A8MU10 97 aa3.71□□□□□ -1.82
HOXD3-203ENST00000432796 MT1GP13640 62 aa3.71□□□□□ -1.82
HOXD3-203ENST00000432796 CCDC179H3BU77 68 aa3.66□□□□□ -1.82
HOXD3-203ENST00000432796 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
HOXD3-203ENST00000432796 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
HOXD3-203ENST00000432796 UQCR11O14957 56 aa3.64□□□□□ -1.83
HOXD3-203ENST00000432796 LINC01558Q9Y6Z2 57 aa3.64□□□□□ -1.83
HOXD3-203ENST00000432796 MT1MQ8N339 61 aa3.63□□□□□ -1.83
HOXD3-203ENST00000432796 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
HOXD3-203ENST00000432796 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
HOXD3-203ENST00000432796 K7ERS5 55 aa3.62□□□□□ -1.83
HOXD3-203ENST00000432796 TMEM258P61165 79 aa3.62□□□□□ -1.83
HOXD3-203ENST00000432796 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
HOXD3-203ENST00000432796 MT1LQ93083 61 aa3.61□□□□□ -1.83
HOXD3-203ENST00000432796 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
HOXD3-203ENST00000432796 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
HOXD3-203ENST00000432796 MIR22HGQ0VDD5 57 aa3.53□□□□□ -1.84
HOXD3-203ENST00000432796 V9GYY9 64 aa3.51□□□□□ -1.85
HOXD3-203ENST00000432796 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
HOXD3-203ENST00000432796 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
HOXD3-203ENST00000432796 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
HOXD3-203ENST00000432796 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
HOXD3-203ENST00000432796 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
HOXD3-203ENST00000432796 PSPHP1O15172 72 aa3.4□□□□□ -1.87
HOXD3-203ENST00000432796 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
HOXD3-203ENST00000432796 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
HOXD3-203ENST00000432796 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
HOXD3-203ENST00000432796 A6NED7 52 aa3.36□□□□□ -1.87
HOXD3-203ENST00000432796 Q1T7F1 81 aa3.36□□□□□ -1.87
HOXD3-203ENST00000432796 KRTAP23-1A1A580 65 aa3.35□□□□□ -1.87
HOXD3-203ENST00000432796 CDC42SE1Q9NRR8 79 aa3.34□□□□□ -1.87
HOXD3-203ENST00000432796 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
HOXD3-203ENST00000432796 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
HOXD3-203ENST00000432796 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
HOXD3-203ENST00000432796 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
HOXD3-203ENST00000432796 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
HOXD3-203ENST00000432796 ROMO1P60602 79 aa3.22□□□□□ -1.89
HOXD3-203ENST00000432796 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
HOXD3-203ENST00000432796 LOC100996750A0A140TA64 210 aa3.2□□□□□ -1.9
HOXD3-203ENST00000432796 MT1AP04731 61 aa3.1□□□□□ -1.91
HOXD3-203ENST00000432796 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
HOXD3-203ENST00000432796 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
HOXD3-203ENST00000432796 PCP4P48539 62 aa3.02□□□□□ -1.93
HOXD3-203ENST00000432796 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
HOXD3-203ENST00000432796 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
HOXD3-203ENST00000432796 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
HOXD3-203ENST00000432796 MT3P25713 68 aa2.87□□□□□ -1.95
HOXD3-203ENST00000432796 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
HOXD3-203ENST00000432796 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
HOXD3-203ENST00000432796 PMAIP1Q13794 54 aa2.64□□□□□ -1.99
HOXD3-203ENST00000432796 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
HOXD3-203ENST00000432796 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
HOXD3-203ENST00000432796 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
HOXD3-203ENST00000432796 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
HOXD3-203ENST00000432796 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
HOXD3-203ENST00000432796 PRAC1Q96KF2 57 aa2.48□□□□□ -2.01
HOXD3-203ENST00000432796 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
HOXD3-203ENST00000432796 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
HOXD3-203ENST00000432796 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
HOXD3-203ENST00000432796 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
HOXD3-203ENST00000432796 SVIPQ8NHG7 77 aa2.32□□□□□ -2.04
HOXD3-203ENST00000432796 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
HOXD3-203ENST00000432796 KTN1-AS1Q86SY8 53 aa2.3□□□□□ -2.04
HOXD3-203ENST00000432796 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
HOXD3-203ENST00000432796 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
HOXD3-203ENST00000432796 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
HOXD3-203ENST00000432796 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
HOXD3-203ENST00000432796 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
HOXD3-203ENST00000432796 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
HOXD3-203ENST00000432796 NDUFAF8A1L188 74 aa1.65□□□□□ -2.15
HOXD3-203ENST00000432796 PRM1P04553 51 aa1.62□□□□□ -2.15
HOXD3-203ENST00000432796 A0A0A0MQY5 61 aa1.38□□□□□ -2.19
HOXD3-203ENST00000432796 INE1O15225 51 aa1.37□□□□□ -2.19
HOXD3-203ENST00000432796 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
HOXD3-203ENST00000432796 H3BS24 57 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 148.5 ms