RNA–Protein interactions for RNA: ENST00000429812.5

PDLIM2-210, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-210ENST00000429812 A0A1B0GU69 56 aa6.11□□□□□ -1.43
PDLIM2-210ENST00000429812 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
PDLIM2-210ENST00000429812 TNP1P09430 55 aa6.09□□□□□ -1.43
PDLIM2-210ENST00000429812 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
PDLIM2-210ENST00000429812 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
PDLIM2-210ENST00000429812 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
PDLIM2-210ENST00000429812 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
PDLIM2-210ENST00000429812 KRTAP5-7Q6L8G8 165 aa5.85□□□□□ -1.47
PDLIM2-210ENST00000429812 KRTAP5-5Q701N2 237 aaPredicted RBP5.83□□□□□ -1.48
PDLIM2-210ENST00000429812 ANAPC13Q9BS18 74 aa5.8□□□□□ -1.48
PDLIM2-210ENST00000429812 PRR15LQ9BU68 103 aa5.8□□□□□ -1.48
PDLIM2-210ENST00000429812 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
PDLIM2-210ENST00000429812 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
PDLIM2-210ENST00000429812 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
PDLIM2-210ENST00000429812 LINC01558Q9Y6Z2 57 aa5.73□□□□□ -1.49
PDLIM2-210ENST00000429812 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
PDLIM2-210ENST00000429812 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
PDLIM2-210ENST00000429812 UQCR11O14957 56 aa5.62□□□□□ -1.51
PDLIM2-210ENST00000429812 ATP5EP56381 51 aaPredicted RBP5.62□□□□□ -1.51
PDLIM2-210ENST00000429812 KRTAP25-1Q3LHN0 102 aa5.6□□□□□ -1.51
PDLIM2-210ENST00000429812 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
PDLIM2-210ENST00000429812 TMEM258P61165 79 aa5.47□□□□□ -1.53
PDLIM2-210ENST00000429812 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
PDLIM2-210ENST00000429812 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
PDLIM2-210ENST00000429812 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
PDLIM2-210ENST00000429812 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
PDLIM2-210ENST00000429812 K7ERS5 55 aa5.39□□□□□ -1.55
PDLIM2-210ENST00000429812 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
PDLIM2-210ENST00000429812 KRTAP5-2Q701N4 177 aa5.36□□□□□ -1.55
PDLIM2-210ENST00000429812 MT1AP04731 61 aa5.35□□□□□ -1.55
PDLIM2-210ENST00000429812 PSPHP1O15172 72 aa5.32□□□□□ -1.56
PDLIM2-210ENST00000429812 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
PDLIM2-210ENST00000429812 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
PDLIM2-210ENST00000429812 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
PDLIM2-210ENST00000429812 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
PDLIM2-210ENST00000429812 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
PDLIM2-210ENST00000429812 Q1T7F1 81 aa5.16□□□□□ -1.58
PDLIM2-210ENST00000429812 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
PDLIM2-210ENST00000429812 V9GYY9 64 aa5.13□□□□□ -1.59
PDLIM2-210ENST00000429812 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
PDLIM2-210ENST00000429812 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
PDLIM2-210ENST00000429812 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
PDLIM2-210ENST00000429812 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
PDLIM2-210ENST00000429812 A6NED7 52 aa5.07□□□□□ -1.6
PDLIM2-210ENST00000429812 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
PDLIM2-210ENST00000429812 ROMO1P60602 79 aa5.02□□□□□ -1.61
PDLIM2-210ENST00000429812 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
PDLIM2-210ENST00000429812 PCP4P48539 62 aa4.94□□□□□ -1.62
PDLIM2-210ENST00000429812 MT3P25713 68 aa4.89□□□□□ -1.63
PDLIM2-210ENST00000429812 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
PDLIM2-210ENST00000429812 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
PDLIM2-210ENST00000429812 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
PDLIM2-210ENST00000429812 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
PDLIM2-210ENST00000429812 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
PDLIM2-210ENST00000429812 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
PDLIM2-210ENST00000429812 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
PDLIM2-210ENST00000429812 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
PDLIM2-210ENST00000429812 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
PDLIM2-210ENST00000429812 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
PDLIM2-210ENST00000429812 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
PDLIM2-210ENST00000429812 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
PDLIM2-210ENST00000429812 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
PDLIM2-210ENST00000429812 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
PDLIM2-210ENST00000429812 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
PDLIM2-210ENST00000429812 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
PDLIM2-210ENST00000429812 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
PDLIM2-210ENST00000429812 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
PDLIM2-210ENST00000429812 SVIPQ8NHG7 77 aa3.47□□□□□ -1.85
PDLIM2-210ENST00000429812 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
PDLIM2-210ENST00000429812 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
PDLIM2-210ENST00000429812 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
PDLIM2-210ENST00000429812 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
PDLIM2-210ENST00000429812 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
PDLIM2-210ENST00000429812 PRM1P04553 51 aa2.6□□□□□ -1.99
PDLIM2-210ENST00000429812 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
PDLIM2-210ENST00000429812 H3BS24 57 aa2.34□□□□□ -2.03
PDLIM2-210ENST00000429812 INE1O15225 51 aa2.34□□□□□ -2.03
PDLIM2-210ENST00000429812 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 66.3 ms