RNA–Protein interactions for RNA: ENST00000429709.6

ACTL6A-202, Transcript of actin like 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTL6A, Length 1,901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-202ENST00000429709 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
ACTL6A-202ENST00000429709 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
ACTL6A-202ENST00000429709 MT1EP04732 61 aa5.55□□□□□ -1.52
ACTL6A-202ENST00000429709 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
ACTL6A-202ENST00000429709 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
ACTL6A-202ENST00000429709 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
ACTL6A-202ENST00000429709 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
ACTL6A-202ENST00000429709 MT1LQ93083 61 aa5.47□□□□□ -1.53
ACTL6A-202ENST00000429709 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
ACTL6A-202ENST00000429709 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
ACTL6A-202ENST00000429709 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
ACTL6A-202ENST00000429709 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
ACTL6A-202ENST00000429709 MT1GP13640 62 aa5.27□□□□□ -1.57
ACTL6A-202ENST00000429709 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
ACTL6A-202ENST00000429709 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
ACTL6A-202ENST00000429709 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
ACTL6A-202ENST00000429709 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
ACTL6A-202ENST00000429709 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
ACTL6A-202ENST00000429709 MT1MQ8N339 61 aa5.21□□□□□ -1.57
ACTL6A-202ENST00000429709 KRTAP9-6A8MVA2 160 aa5.21□□□□□ -1.58
ACTL6A-202ENST00000429709 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
ACTL6A-202ENST00000429709 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
ACTL6A-202ENST00000429709 LCE1AQ5T7P2 110 aa5.07□□□□□ -1.6
ACTL6A-202ENST00000429709 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
ACTL6A-202ENST00000429709 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
ACTL6A-202ENST00000429709 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
ACTL6A-202ENST00000429709 SPRR2EP22531 72 aa4.99□□□□□ -1.61
ACTL6A-202ENST00000429709 SPRR2BP35325 72 aa4.99□□□□□ -1.61
ACTL6A-202ENST00000429709 SPRR2AP35326 72 aa4.99□□□□□ -1.61
ACTL6A-202ENST00000429709 MDN1Q9NU22 5596 aa4.95□□□□□ -1.62
ACTL6A-202ENST00000429709 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.62
ACTL6A-202ENST00000429709 LCE4AQ5TA78 99 aa4.9□□□□□ -1.62
ACTL6A-202ENST00000429709 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.62
ACTL6A-202ENST00000429709 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.62
ACTL6A-202ENST00000429709 SPRR2DP22532 72 aa4.81□□□□□ -1.64
ACTL6A-202ENST00000429709 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
ACTL6A-202ENST00000429709 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
ACTL6A-202ENST00000429709 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
ACTL6A-202ENST00000429709 MT1AP04731 61 aa4.65□□□□□ -1.67
ACTL6A-202ENST00000429709 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
ACTL6A-202ENST00000429709 NEBP20929 6669 aa4.58□□□□□ -1.68
ACTL6A-202ENST00000429709 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.7
ACTL6A-202ENST00000429709 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
ACTL6A-202ENST00000429709 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
ACTL6A-202ENST00000429709 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
ACTL6A-202ENST00000429709 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
ACTL6A-202ENST00000429709 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
ACTL6A-202ENST00000429709 MT3P25713 68 aa4.19□□□□□ -1.74
ACTL6A-202ENST00000429709 MT4P47944 62 aa4.15□□□□□ -1.74
ACTL6A-202ENST00000429709 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.74
ACTL6A-202ENST00000429709 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
ACTL6A-202ENST00000429709 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
ACTL6A-202ENST00000429709 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
ACTL6A-202ENST00000429709 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
ACTL6A-202ENST00000429709 PRM1P04553 51 aa3.87□□□□□ -1.79
ACTL6A-202ENST00000429709 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
ACTL6A-202ENST00000429709 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
ACTL6A-202ENST00000429709 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
ACTL6A-202ENST00000429709 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
ACTL6A-202ENST00000429709 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
ACTL6A-202ENST00000429709 KRTAP5-10Q6L8G5 202 aa3.42□□□□□ -1.86
ACTL6A-202ENST00000429709 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
ACTL6A-202ENST00000429709 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
ACTL6A-202ENST00000429709 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
ACTL6A-202ENST00000429709 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
ACTL6A-202ENST00000429709 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
ACTL6A-202ENST00000429709 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
ACTL6A-202ENST00000429709 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
ACTL6A-202ENST00000429709 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
ACTL6A-202ENST00000429709 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
ACTL6A-202ENST00000429709 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
ACTL6A-202ENST00000429709 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
ACTL6A-202ENST00000429709 PHGR1C9JFL3 82 aa2.54□□□□□ -2
ACTL6A-202ENST00000429709 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
ACTL6A-202ENST00000429709 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
ACTL6A-202ENST00000429709 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
ACTL6A-202ENST00000429709 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 86.3 ms