RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 MUC2Q02817 5179 aa2.08□□□□□ -2.08
ATP13A3-202ENST00000429136 FAT4Q6V0I7 4981 aa2.07□□□□□ -2.08
ATP13A3-202ENST00000429136 KRTAP10-7P60409 375 aaPredicted RBP2.07□□□□□ -2.08
ATP13A3-202ENST00000429136 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
ATP13A3-202ENST00000429136 UBR4Q5T4S7 5183 aa2.02□□□□□ -2.09
ATP13A3-202ENST00000429136 INE1O15225 51 aa2.01□□□□□ -2.09
ATP13A3-202ENST00000429136 LCE5AQ5TCM9 118 aa2.01□□□□□ -2.09
ATP13A3-202ENST00000429136 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
ATP13A3-202ENST00000429136 KRTAP9-7A8MTY7 169 aa1.91□□□□□ -2.1
ATP13A3-202ENST00000429136 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
ATP13A3-202ENST00000429136 LCE4AQ5TA78 99 aa1.89□□□□□ -2.11
ATP13A3-202ENST00000429136 KRTAP19-6Q3LI70 58 aa1.88□□□□□ -2.11
ATP13A3-202ENST00000429136 MT1EP04732 61 aa1.87□□□□□ -2.11
ATP13A3-202ENST00000429136 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
ATP13A3-202ENST00000429136 MT1LQ93083 61 aa1.87□□□□□ -2.11
ATP13A3-202ENST00000429136 CRCT1Q9UGL9 99 aa1.83□□□□□ -2.12
ATP13A3-202ENST00000429136 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
ATP13A3-202ENST00000429136 MT1GP13640 62 aa1.82□□□□□ -2.12
ATP13A3-202ENST00000429136 SPRR2FQ96RM1 72 aa1.81□□□□□ -2.12
ATP13A3-202ENST00000429136 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
ATP13A3-202ENST00000429136 USH2AO75445 5202 aa1.79□□□□□ -2.12
ATP13A3-202ENST00000429136 KRTAP5-4Q6L8H1 288 aa1.79□□□□□ -2.12
ATP13A3-202ENST00000429136 KRTAP9-6A8MVA2 160 aa1.77□□□□□ -2.13
ATP13A3-202ENST00000429136 MT1MQ8N339 61 aa1.77□□□□□ -2.13
ATP13A3-202ENST00000429136 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
ATP13A3-202ENST00000429136 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
ATP13A3-202ENST00000429136 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
ATP13A3-202ENST00000429136 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
ATP13A3-202ENST00000429136 KRTAP2-2Q9BYT5 123 aa1.74□□□□□ -2.13
ATP13A3-202ENST00000429136 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
ATP13A3-202ENST00000429136 KMT2DO14686 5537 aa1.7□□□□□ -2.14
ATP13A3-202ENST00000429136 SSPOA2VEC9 5147 aa1.68□□□□□ -2.14
ATP13A3-202ENST00000429136 SPRR2EP22531 72 aa1.68□□□□□ -2.14
ATP13A3-202ENST00000429136 SPRR2BP35325 72 aa1.68□□□□□ -2.14
ATP13A3-202ENST00000429136 SPRR2AP35326 72 aa1.68□□□□□ -2.14
ATP13A3-202ENST00000429136 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
ATP13A3-202ENST00000429136 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
ATP13A3-202ENST00000429136 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
ATP13A3-202ENST00000429136 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
ATP13A3-202ENST00000429136 SPRR2DP22532 72 aa1.62□□□□□ -2.15
ATP13A3-202ENST00000429136 MT1AP04731 61 aa1.61□□□□□ -2.15
ATP13A3-202ENST00000429136 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
ATP13A3-202ENST00000429136 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
ATP13A3-202ENST00000429136 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
ATP13A3-202ENST00000429136 LCE1AQ5T7P2 110 aa1.6□□□□□ -2.15
ATP13A3-202ENST00000429136 LCE1EQ5T753 118 aa1.59□□□□□ -2.15
ATP13A3-202ENST00000429136 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
ATP13A3-202ENST00000429136 LCE3DQ9BYE3 92 aa1.58□□□□□ -2.16
ATP13A3-202ENST00000429136 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
ATP13A3-202ENST00000429136 LCE3EQ5T5B0 92 aa1.57□□□□□ -2.16
ATP13A3-202ENST00000429136 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
ATP13A3-202ENST00000429136 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
ATP13A3-202ENST00000429136 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.17
ATP13A3-202ENST00000429136 MT3P25713 68 aa1.51□□□□□ -2.17
ATP13A3-202ENST00000429136 MACF1Q9UPN3 7388 aaKnown RBP1.51□□□□□ -2.17
ATP13A3-202ENST00000429136 DSTQ03001 7570 aaKnown RBP1.49□□□□□ -2.17
ATP13A3-202ENST00000429136 KRTAP5-5Q701N2 237 aaPredicted RBP1.46□□□□□ -2.18
ATP13A3-202ENST00000429136 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
ATP13A3-202ENST00000429136 PRM1P04553 51 aa1.44□□□□□ -2.18
ATP13A3-202ENST00000429136 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
ATP13A3-202ENST00000429136 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
ATP13A3-202ENST00000429136 MT4P47944 62 aa1.4□□□□□ -2.19
ATP13A3-202ENST00000429136 MDN1Q9NU22 5596 aa1.39□□□□□ -2.19
ATP13A3-202ENST00000429136 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
ATP13A3-202ENST00000429136 NEBP20929 6669 aa1.35□□□□□ -2.19
ATP13A3-202ENST00000429136 KRTAP20-2Q3LI61 65 aa1.3□□□□□ -2.2
ATP13A3-202ENST00000429136 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
ATP13A3-202ENST00000429136 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
ATP13A3-202ENST00000429136 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
ATP13A3-202ENST00000429136 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
ATP13A3-202ENST00000429136 LCE1CQ5T751 118 aa1.09□□□□□ -2.24
ATP13A3-202ENST00000429136 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
ATP13A3-202ENST00000429136 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
ATP13A3-202ENST00000429136 MUC19Q7Z5P9 8384 aa1□□□□□ -2.25
ATP13A3-202ENST00000429136 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
ATP13A3-202ENST00000429136 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
ATP13A3-202ENST00000429136 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
ATP13A3-202ENST00000429136 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 92.9 ms