RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TNP1P09430 55 aa5.96□□□□□ -1.46
TRIM39-209ENST00000428728 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
TRIM39-209ENST00000428728 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
TRIM39-209ENST00000428728 TMEM258P61165 79 aa5.85□□□□□ -1.47
TRIM39-209ENST00000428728 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
TRIM39-209ENST00000428728 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
TRIM39-209ENST00000428728 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
TRIM39-209ENST00000428728 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
TRIM39-209ENST00000428728 AHNAK2Q8IVF2 5795 aa5.75□□□□□ -1.49
TRIM39-209ENST00000428728 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
TRIM39-209ENST00000428728 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
TRIM39-209ENST00000428728 LINC01558Q9Y6Z2 57 aa5.67□□□□□ -1.5
TRIM39-209ENST00000428728 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
TRIM39-209ENST00000428728 KRTAP20-2Q3LI61 65 aa5.59□□□□□ -1.51
TRIM39-209ENST00000428728 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
TRIM39-209ENST00000428728 UQCR11O14957 56 aa5.58□□□□□ -1.52
TRIM39-209ENST00000428728 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
TRIM39-209ENST00000428728 KRTAP5-7Q6L8G8 165 aa5.54□□□□□ -1.52
TRIM39-209ENST00000428728 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
TRIM39-209ENST00000428728 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
TRIM39-209ENST00000428728 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
TRIM39-209ENST00000428728 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
TRIM39-209ENST00000428728 V9GYY9 64 aa5.46□□□□□ -1.54
TRIM39-209ENST00000428728 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
TRIM39-209ENST00000428728 Q1T7F1 81 aa5.43□□□□□ -1.54
TRIM39-209ENST00000428728 K7ERS5 55 aa5.38□□□□□ -1.55
TRIM39-209ENST00000428728 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
TRIM39-209ENST00000428728 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
TRIM39-209ENST00000428728 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
TRIM39-209ENST00000428728 PSPHP1O15172 72 aa5.27□□□□□ -1.57
TRIM39-209ENST00000428728 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
TRIM39-209ENST00000428728 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
TRIM39-209ENST00000428728 MT1AP04731 61 aa5.16□□□□□ -1.58
TRIM39-209ENST00000428728 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
TRIM39-209ENST00000428728 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
TRIM39-209ENST00000428728 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
TRIM39-209ENST00000428728 A6NED7 52 aa5.12□□□□□ -1.59
TRIM39-209ENST00000428728 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
TRIM39-209ENST00000428728 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
TRIM39-209ENST00000428728 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
TRIM39-209ENST00000428728 KRTAP5-8O75690 187 aa4.97□□□□□ -1.61
TRIM39-209ENST00000428728 ROMO1P60602 79 aa4.97□□□□□ -1.61
TRIM39-209ENST00000428728 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
TRIM39-209ENST00000428728 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
TRIM39-209ENST00000428728 BRK1Q8WUW1 75 aa4.94□□□□□ -1.62
TRIM39-209ENST00000428728 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
TRIM39-209ENST00000428728 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
TRIM39-209ENST00000428728 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
TRIM39-209ENST00000428728 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
TRIM39-209ENST00000428728 MT3P25713 68 aa4.71□□□□□ -1.66
TRIM39-209ENST00000428728 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
TRIM39-209ENST00000428728 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
TRIM39-209ENST00000428728 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
TRIM39-209ENST00000428728 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
TRIM39-209ENST00000428728 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
TRIM39-209ENST00000428728 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
TRIM39-209ENST00000428728 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
TRIM39-209ENST00000428728 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
TRIM39-209ENST00000428728 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
TRIM39-209ENST00000428728 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
TRIM39-209ENST00000428728 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
TRIM39-209ENST00000428728 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
TRIM39-209ENST00000428728 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
TRIM39-209ENST00000428728 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
TRIM39-209ENST00000428728 H3BS24 57 aa3.65□□□□□ -1.83
TRIM39-209ENST00000428728 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
TRIM39-209ENST00000428728 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
TRIM39-209ENST00000428728 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
TRIM39-209ENST00000428728 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
TRIM39-209ENST00000428728 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
TRIM39-209ENST00000428728 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
TRIM39-209ENST00000428728 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
TRIM39-209ENST00000428728 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
TRIM39-209ENST00000428728 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
TRIM39-209ENST00000428728 INE1O15225 51 aa2.92□□□□□ -1.94
TRIM39-209ENST00000428728 PRM1P04553 51 aa2.56□□□□□ -2
TRIM39-209ENST00000428728 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
TRIM39-209ENST00000428728 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 56.5 ms