RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
CNOT4-206ENST00000428680 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
CNOT4-206ENST00000428680 KRTAP19-4Q3LI73 84 aa2.75□□□□□ -1.97
CNOT4-206ENST00000428680 USH2AO75445 5202 aa2.75□□□□□ -1.97
CNOT4-206ENST00000428680 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
CNOT4-206ENST00000428680 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
CNOT4-206ENST00000428680 NEBP20929 6669 aa2.73□□□□□ -1.97
CNOT4-206ENST00000428680 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
CNOT4-206ENST00000428680 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
CNOT4-206ENST00000428680 MT1XP80297 61 aa2.63□□□□□ -1.99
CNOT4-206ENST00000428680 MT1GP13640 62 aa2.62□□□□□ -1.99
CNOT4-206ENST00000428680 LOC100996750A0A140TA64 210 aa2.62□□□□□ -1.99
CNOT4-206ENST00000428680 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
CNOT4-206ENST00000428680 INE1O15225 51 aa2.61□□□□□ -1.99
CNOT4-206ENST00000428680 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
CNOT4-206ENST00000428680 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
CNOT4-206ENST00000428680 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
CNOT4-206ENST00000428680 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
CNOT4-206ENST00000428680 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
CNOT4-206ENST00000428680 KRTAP4-8A0A0G2JLE6 195 aa2.56□□□□□ -2
CNOT4-206ENST00000428680 KRTAP4-8Q9BYQ9 185 aa2.56□□□□□ -2
CNOT4-206ENST00000428680 MT4P47944 62 aa2.54□□□□□ -2
CNOT4-206ENST00000428680 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
CNOT4-206ENST00000428680 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
CNOT4-206ENST00000428680 KMT2DO14686 5537 aa2.45□□□□□ -2.02
CNOT4-206ENST00000428680 LCE5AQ5TCM9 118 aa2.42□□□□□ -2.02
CNOT4-206ENST00000428680 MT1EP04732 61 aa2.41□□□□□ -2.02
CNOT4-206ENST00000428680 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
CNOT4-206ENST00000428680 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
CNOT4-206ENST00000428680 MT3P25713 68 aa2.35□□□□□ -2.03
CNOT4-206ENST00000428680 MT1LQ93083 61 aa2.35□□□□□ -2.03
CNOT4-206ENST00000428680 MT1MQ8N339 61 aa2.33□□□□□ -2.04
CNOT4-206ENST00000428680 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
CNOT4-206ENST00000428680 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
CNOT4-206ENST00000428680 LCE1DQ5T752 114 aa2.32□□□□□ -2.04
CNOT4-206ENST00000428680 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
CNOT4-206ENST00000428680 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
CNOT4-206ENST00000428680 KRTAP4-7Q9BYR0 210 aa2.27□□□□□ -2.05
CNOT4-206ENST00000428680 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CNOT4-206ENST00000428680 KRTAP4-9Q9BYQ8 210 aa2.26□□□□□ -2.05
CNOT4-206ENST00000428680 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
CNOT4-206ENST00000428680 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
CNOT4-206ENST00000428680 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
CNOT4-206ENST00000428680 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
CNOT4-206ENST00000428680 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.06
CNOT4-206ENST00000428680 MT1AP04731 61 aa2.14□□□□□ -2.07
CNOT4-206ENST00000428680 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
CNOT4-206ENST00000428680 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
CNOT4-206ENST00000428680 KRTAP9-4Q9BYQ2 154 aa2.12□□□□□ -2.07
CNOT4-206ENST00000428680 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
CNOT4-206ENST00000428680 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
CNOT4-206ENST00000428680 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
CNOT4-206ENST00000428680 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CNOT4-206ENST00000428680 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
CNOT4-206ENST00000428680 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
CNOT4-206ENST00000428680 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
CNOT4-206ENST00000428680 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CNOT4-206ENST00000428680 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
CNOT4-206ENST00000428680 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
CNOT4-206ENST00000428680 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
CNOT4-206ENST00000428680 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
CNOT4-206ENST00000428680 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
CNOT4-206ENST00000428680 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
CNOT4-206ENST00000428680 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
CNOT4-206ENST00000428680 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
CNOT4-206ENST00000428680 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CNOT4-206ENST00000428680 PRM1P04553 51 aa1.9□□□□□ -2.1
CNOT4-206ENST00000428680 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
CNOT4-206ENST00000428680 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
CNOT4-206ENST00000428680 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
CNOT4-206ENST00000428680 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
CNOT4-206ENST00000428680 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
CNOT4-206ENST00000428680 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
CNOT4-206ENST00000428680 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
CNOT4-206ENST00000428680 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
CNOT4-206ENST00000428680 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
CNOT4-206ENST00000428680 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms