RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
NCBP2-205ENST00000428425 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
NCBP2-205ENST00000428425 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
NCBP2-205ENST00000428425 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
NCBP2-205ENST00000428425 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
NCBP2-205ENST00000428425 MT1EP04732 61 aa4.93□□□□□ -1.62
NCBP2-205ENST00000428425 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
NCBP2-205ENST00000428425 MT1LQ93083 61 aa4.88□□□□□ -1.63
NCBP2-205ENST00000428425 KRTAP5-9P26371 169 aa4.87□□□□□ -1.63
NCBP2-205ENST00000428425 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
NCBP2-205ENST00000428425 NEBP20929 6669 aa4.82□□□□□ -1.64
NCBP2-205ENST00000428425 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
NCBP2-205ENST00000428425 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
NCBP2-205ENST00000428425 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
NCBP2-205ENST00000428425 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
NCBP2-205ENST00000428425 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
NCBP2-205ENST00000428425 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
NCBP2-205ENST00000428425 MT1MQ8N339 61 aa4.62□□□□□ -1.67
NCBP2-205ENST00000428425 SPRR2EP22531 72 aa4.61□□□□□ -1.67
NCBP2-205ENST00000428425 SPRR2BP35325 72 aa4.61□□□□□ -1.67
NCBP2-205ENST00000428425 SPRR2AP35326 72 aa4.61□□□□□ -1.67
NCBP2-205ENST00000428425 INE1O15225 51 aa4.6□□□□□ -1.67
NCBP2-205ENST00000428425 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
NCBP2-205ENST00000428425 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
NCBP2-205ENST00000428425 MT1GP13640 62 aa4.58□□□□□ -1.68
NCBP2-205ENST00000428425 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
NCBP2-205ENST00000428425 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
NCBP2-205ENST00000428425 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
NCBP2-205ENST00000428425 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
NCBP2-205ENST00000428425 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
NCBP2-205ENST00000428425 SPRR2DP22532 72 aa4.46□□□□□ -1.7
NCBP2-205ENST00000428425 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
NCBP2-205ENST00000428425 LCE3BQ5TA77 95 aa4.34□□□□□ -1.72
NCBP2-205ENST00000428425 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
NCBP2-205ENST00000428425 KRTAP9-4Q9BYQ2 154 aa4.21□□□□□ -1.74
NCBP2-205ENST00000428425 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
NCBP2-205ENST00000428425 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
NCBP2-205ENST00000428425 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
NCBP2-205ENST00000428425 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
NCBP2-205ENST00000428425 MT1AP04731 61 aa4.09□□□□□ -1.75
NCBP2-205ENST00000428425 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
NCBP2-205ENST00000428425 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
NCBP2-205ENST00000428425 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
NCBP2-205ENST00000428425 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
NCBP2-205ENST00000428425 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
NCBP2-205ENST00000428425 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
NCBP2-205ENST00000428425 AHNAK2Q8IVF2 5795 aa3.96□□□□□ -1.78
NCBP2-205ENST00000428425 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
NCBP2-205ENST00000428425 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
NCBP2-205ENST00000428425 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
NCBP2-205ENST00000428425 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
NCBP2-205ENST00000428425 MT4P47944 62 aa3.85□□□□□ -1.79
NCBP2-205ENST00000428425 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
NCBP2-205ENST00000428425 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
NCBP2-205ENST00000428425 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
NCBP2-205ENST00000428425 KRTAP5-10Q6L8G5 202 aa3.76□□□□□ -1.81
NCBP2-205ENST00000428425 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
NCBP2-205ENST00000428425 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
NCBP2-205ENST00000428425 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
NCBP2-205ENST00000428425 MT3P25713 68 aa3.66□□□□□ -1.82
NCBP2-205ENST00000428425 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
NCBP2-205ENST00000428425 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
NCBP2-205ENST00000428425 PRM1P04553 51 aa3.44□□□□□ -1.86
NCBP2-205ENST00000428425 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
NCBP2-205ENST00000428425 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
NCBP2-205ENST00000428425 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
NCBP2-205ENST00000428425 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
NCBP2-205ENST00000428425 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
NCBP2-205ENST00000428425 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
NCBP2-205ENST00000428425 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
NCBP2-205ENST00000428425 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
NCBP2-205ENST00000428425 LCE1FQ5T754 118 aa2.56□□□□□ -2
NCBP2-205ENST00000428425 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
NCBP2-205ENST00000428425 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
NCBP2-205ENST00000428425 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
NCBP2-205ENST00000428425 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.05
NCBP2-205ENST00000428425 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
NCBP2-205ENST00000428425 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 64.2 ms