RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 LINC00643Q86TS7 51 aa2.66□□□□□ -1.98
ITSN1-216ENST00000428240 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
ITSN1-216ENST00000428240 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
ITSN1-216ENST00000428240 LOC100996750A0A140TA64 210 aa2.62□□□□□ -1.99
ITSN1-216ENST00000428240 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
ITSN1-216ENST00000428240 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
ITSN1-216ENST00000428240 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
ITSN1-216ENST00000428240 SCGB1A1P11684 91 aa2.58□□□□□ -2
ITSN1-216ENST00000428240 KRTAP15-1Q3LI76 137 aa2.58□□□□□ -2
ITSN1-216ENST00000428240 LOC105371267A0A1B0GV96 52 aa2.57□□□□□ -2
ITSN1-216ENST00000428240 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
ITSN1-216ENST00000428240 KRTAP12-3P60328 96 aa2.55□□□□□ -2
ITSN1-216ENST00000428240 TNP1P09430 55 aa2.54□□□□□ -2
ITSN1-216ENST00000428240 PSPHP1O15172 72 aa2.53□□□□□ -2
ITSN1-216ENST00000428240 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
ITSN1-216ENST00000428240 A0A1B0GU33 70 aa2.5□□□□□ -2.01
ITSN1-216ENST00000428240 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
ITSN1-216ENST00000428240 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
ITSN1-216ENST00000428240 SERP1Q9Y6X1 66 aa2.49□□□□□ -2.01
ITSN1-216ENST00000428240 SNURFQ9Y675 71 aa2.47□□□□□ -2.01
ITSN1-216ENST00000428240 SMIM26A0A096LP01 95 aa2.46□□□□□ -2.02
ITSN1-216ENST00000428240 A8MU10 97 aa2.45□□□□□ -2.02
ITSN1-216ENST00000428240 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
ITSN1-216ENST00000428240 SPANXA2-OT1Q8N9U9 137 aa2.45□□□□□ -2.02
ITSN1-216ENST00000428240 MT1AP04731 61 aa2.42□□□□□ -2.02
ITSN1-216ENST00000428240 COA5Q86WW8 74 aa2.42□□□□□ -2.02
ITSN1-216ENST00000428240 KRTAP9-4Q9BYQ2 154 aa2.41□□□□□ -2.02
ITSN1-216ENST00000428240 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
ITSN1-216ENST00000428240 SMIM20Q8N5G0 67 aa2.4□□□□□ -2.03
ITSN1-216ENST00000428240 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
ITSN1-216ENST00000428240 PMAIP1Q13794 54 aa2.39□□□□□ -2.03
ITSN1-216ENST00000428240 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
ITSN1-216ENST00000428240 ANAPC13Q9BS18 74 aa2.34□□□□□ -2.03
ITSN1-216ENST00000428240 LCE3CQ5T5A8 94 aa2.33□□□□□ -2.04
ITSN1-216ENST00000428240 J3QR89 54 aa2.32□□□□□ -2.04
ITSN1-216ENST00000428240 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
ITSN1-216ENST00000428240 SERP2Q8N6R1 65 aa2.3□□□□□ -2.04
ITSN1-216ENST00000428240 A0A1B0GU69 56 aa2.29□□□□□ -2.04
ITSN1-216ENST00000428240 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
ITSN1-216ENST00000428240 A0A1B0GV90 55 aa2.26□□□□□ -2.05
ITSN1-216ENST00000428240 RPS28P62857 69 aaKnown RBP2.25□□□□□ -2.05
ITSN1-216ENST00000428240 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
ITSN1-216ENST00000428240 MT3P25713 68 aa2.22□□□□□ -2.05
ITSN1-216ENST00000428240 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
ITSN1-216ENST00000428240 K7ERS5 55 aa2.2□□□□□ -2.06
ITSN1-216ENST00000428240 KTN1-AS1Q86SY8 53 aa2.18□□□□□ -2.06
ITSN1-216ENST00000428240 H7BZZ5 65 aa2.14□□□□□ -2.07
ITSN1-216ENST00000428240 LCE1EQ5T753 118 aa2.12□□□□□ -2.07
ITSN1-216ENST00000428240 PRR15LQ9BU68 103 aa2.12□□□□□ -2.07
ITSN1-216ENST00000428240 A6NED7 52 aa2.1□□□□□ -2.07
ITSN1-216ENST00000428240 K7ERU9 68 aa2.08□□□□□ -2.08
ITSN1-216ENST00000428240 COX7CP15954 63 aa2.07□□□□□ -2.08
ITSN1-216ENST00000428240 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
ITSN1-216ENST00000428240 UQCR11O14957 56 aa2.04□□□□□ -2.08
ITSN1-216ENST00000428240 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
ITSN1-216ENST00000428240 LINC01558Q9Y6Z2 57 aa2.03□□□□□ -2.08
ITSN1-216ENST00000428240 BRK1Q8WUW1 75 aa1.99□□□□□ -2.09
ITSN1-216ENST00000428240 MIR22HGQ0VDD5 57 aa1.97□□□□□ -2.09
ITSN1-216ENST00000428240 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
ITSN1-216ENST00000428240 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
ITSN1-216ENST00000428240 ROMO1P60602 79 aa1.92□□□□□ -2.1
ITSN1-216ENST00000428240 TMEM258P61165 79 aa1.89□□□□□ -2.11
ITSN1-216ENST00000428240 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
ITSN1-216ENST00000428240 CCDC179H3BU77 68 aa1.86□□□□□ -2.11
ITSN1-216ENST00000428240 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
ITSN1-216ENST00000428240 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
ITSN1-216ENST00000428240 CDC42SE1Q9NRR8 79 aa1.83□□□□□ -2.12
ITSN1-216ENST00000428240 Q1T7F1 81 aa1.82□□□□□ -2.12
ITSN1-216ENST00000428240 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
ITSN1-216ENST00000428240 INE1O15225 51 aa1.64□□□□□ -2.15
ITSN1-216ENST00000428240 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
ITSN1-216ENST00000428240 LCE3EQ5T5B0 92 aa1.6□□□□□ -2.15
ITSN1-216ENST00000428240 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
ITSN1-216ENST00000428240 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
ITSN1-216ENST00000428240 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
ITSN1-216ENST00000428240 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
ITSN1-216ENST00000428240 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
ITSN1-216ENST00000428240 PRM1P04553 51 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 124.8 ms