RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 LOC100996750A0A140TA64 210 aa2.71□□□□□ -1.98
LRCH3-204ENST00000428136 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
LRCH3-204ENST00000428136 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
LRCH3-204ENST00000428136 KRTAP19-6Q3LI70 58 aa2.69□□□□□ -1.98
LRCH3-204ENST00000428136 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
LRCH3-204ENST00000428136 MT1GP13640 62 aa2.55□□□□□ -2
LRCH3-204ENST00000428136 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
LRCH3-204ENST00000428136 MT1MQ8N339 61 aa2.54□□□□□ -2
LRCH3-204ENST00000428136 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
LRCH3-204ENST00000428136 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
LRCH3-204ENST00000428136 KRTAP9-2Q9BYQ4 174 aa2.52□□□□□ -2.01
LRCH3-204ENST00000428136 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
LRCH3-204ENST00000428136 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.5□□□□□ -2.01
LRCH3-204ENST00000428136 KRTAP9-6A0A140TA67 174 aa2.5□□□□□ -2.01
LRCH3-204ENST00000428136 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
LRCH3-204ENST00000428136 LCE3BQ5TA77 95 aa2.48□□□□□ -2.01
LRCH3-204ENST00000428136 LCE5AQ5TCM9 118 aa2.47□□□□□ -2.01
LRCH3-204ENST00000428136 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
LRCH3-204ENST00000428136 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
LRCH3-204ENST00000428136 KRTAP9-7A8MTY7 169 aa2.43□□□□□ -2.02
LRCH3-204ENST00000428136 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
LRCH3-204ENST00000428136 KRTAP9-9Q9BYP9 154 aa2.39□□□□□ -2.03
LRCH3-204ENST00000428136 KRTAP9-4Q9BYQ2 154 aa2.39□□□□□ -2.03
LRCH3-204ENST00000428136 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
LRCH3-204ENST00000428136 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
LRCH3-204ENST00000428136 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
LRCH3-204ENST00000428136 MT1AP04731 61 aa2.35□□□□□ -2.03
LRCH3-204ENST00000428136 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
LRCH3-204ENST00000428136 LCE1DQ5T752 114 aa2.32□□□□□ -2.04
LRCH3-204ENST00000428136 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
LRCH3-204ENST00000428136 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
LRCH3-204ENST00000428136 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
LRCH3-204ENST00000428136 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
LRCH3-204ENST00000428136 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
LRCH3-204ENST00000428136 LCE1AQ5T7P2 110 aa2.27□□□□□ -2.05
LRCH3-204ENST00000428136 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
LRCH3-204ENST00000428136 KRTAP4-9Q9BYQ8 210 aa2.25□□□□□ -2.05
LRCH3-204ENST00000428136 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
LRCH3-204ENST00000428136 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
LRCH3-204ENST00000428136 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
LRCH3-204ENST00000428136 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
LRCH3-204ENST00000428136 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
LRCH3-204ENST00000428136 SYNE1Q8NF91 8797 aaKnown RBP2.17□□□□□ -2.06
LRCH3-204ENST00000428136 KRTAP4-11Q9BYQ6 195 aa2.17□□□□□ -2.06
LRCH3-204ENST00000428136 SPRR2EP22531 72 aa2.16□□□□□ -2.06
LRCH3-204ENST00000428136 SPRR2BP35325 72 aa2.16□□□□□ -2.06
LRCH3-204ENST00000428136 SPRR2AP35326 72 aa2.16□□□□□ -2.06
LRCH3-204ENST00000428136 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
LRCH3-204ENST00000428136 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
LRCH3-204ENST00000428136 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
LRCH3-204ENST00000428136 PRM1P04553 51 aa2.08□□□□□ -2.08
LRCH3-204ENST00000428136 SPRR2DP22532 72 aa2.07□□□□□ -2.08
LRCH3-204ENST00000428136 MT3P25713 68 aa2.06□□□□□ -2.08
LRCH3-204ENST00000428136 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
LRCH3-204ENST00000428136 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
LRCH3-204ENST00000428136 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
LRCH3-204ENST00000428136 NEBP20929 6669 aa1.92□□□□□ -2.1
LRCH3-204ENST00000428136 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
LRCH3-204ENST00000428136 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
LRCH3-204ENST00000428136 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
LRCH3-204ENST00000428136 MT4P47944 62 aa1.79□□□□□ -2.12
LRCH3-204ENST00000428136 KRTAP20-1Q3LI63 56 aa1.75□□□□□ -2.13
LRCH3-204ENST00000428136 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
LRCH3-204ENST00000428136 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
LRCH3-204ENST00000428136 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
LRCH3-204ENST00000428136 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
LRCH3-204ENST00000428136 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
LRCH3-204ENST00000428136 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
LRCH3-204ENST00000428136 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
LRCH3-204ENST00000428136 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
LRCH3-204ENST00000428136 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
LRCH3-204ENST00000428136 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
LRCH3-204ENST00000428136 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
LRCH3-204ENST00000428136 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
LRCH3-204ENST00000428136 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
LRCH3-204ENST00000428136 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
LRCH3-204ENST00000428136 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
LRCH3-204ENST00000428136 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 88.2 ms