RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 V9GYY9 64 aa9.57□□□□□ -0.88
LMO1-202ENST00000428101 TNP1P09430 55 aa9.54□□□□□ -0.88
LMO1-202ENST00000428101 LCE4AQ5TA78 99 aa9.54□□□□□ -0.88
LMO1-202ENST00000428101 Q1T7F1 81 aa9.5□□□□□ -0.89
LMO1-202ENST00000428101 KRTAP4-3Q9BYR4 195 aa9.5□□□□□ -0.89
LMO1-202ENST00000428101 MT4P47944 62 aa9.48□□□□□ -0.89
LMO1-202ENST00000428101 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.9
LMO1-202ENST00000428101 PSPHP1O15172 72 aa9.44□□□□□ -0.9
LMO1-202ENST00000428101 PCP4P48539 62 aa9.44□□□□□ -0.9
LMO1-202ENST00000428101 HMCN1Q96RW7 5635 aa9.43□□□□□ -0.9
LMO1-202ENST00000428101 KRTAP5-4Q6L8H1 288 aa9.37□□□□□ -0.91
LMO1-202ENST00000428101 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
LMO1-202ENST00000428101 K7ERS5 55 aa9.24□□□□□ -0.93
LMO1-202ENST00000428101 KRTAP4-6Q9BYQ5 205 aa9.23□□□□□ -0.93
LMO1-202ENST00000428101 KRTAP4-7Q9BYR0 210 aa9.23□□□□□ -0.93
LMO1-202ENST00000428101 KRTAP12-3P60328 96 aa9.22□□□□□ -0.93
LMO1-202ENST00000428101 A6NED7 52 aa9.16□□□□□ -0.94
LMO1-202ENST00000428101 AHNAK2Q8IVF2 5795 aa9.13□□□□□ -0.95
LMO1-202ENST00000428101 KRTAP5-10Q6L8G5 202 aa9.05□□□□□ -0.96
LMO1-202ENST00000428101 KRTAP25-1Q3LHN0 102 aa9.02□□□□□ -0.97
LMO1-202ENST00000428101 KRTAP5-5Q701N2 237 aaPredicted RBP8.93□□□□□ -0.98
LMO1-202ENST00000428101 KRTAP20-2Q3LI61 65 aa8.85□□□□□ -0.99
LMO1-202ENST00000428101 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
LMO1-202ENST00000428101 KRTAP5-3Q6L8H2 238 aa8.79□□□□□ -1
LMO1-202ENST00000428101 SPRR5A0A1B0GTR4 108 aa8.77□□□□□ -1.01
LMO1-202ENST00000428101 LOC100996750A0A140TA64 210 aa8.75□□□□□ -1.01
LMO1-202ENST00000428101 KRTAP5-7Q6L8G8 165 aa8.72□□□□□ -1.01
LMO1-202ENST00000428101 KRTAP23-1A1A580 65 aa8.71□□□□□ -1.02
LMO1-202ENST00000428101 KRTAP12-4P60329 112 aa8.69□□□□□ -1.02
LMO1-202ENST00000428101 ROMO1P60602 79 aa8.66□□□□□ -1.02
LMO1-202ENST00000428101 KRTAP19-4Q3LI73 84 aa8.66□□□□□ -1.02
LMO1-202ENST00000428101 SYNE1Q8NF91 8797 aaKnown RBP8.54□□□□□ -1.04
LMO1-202ENST00000428101 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
LMO1-202ENST00000428101 LCE3CQ5T5A8 94 aa8.48□□□□□ -1.05
LMO1-202ENST00000428101 MT1AP04731 61 aa8.22□□□□□ -1.09
LMO1-202ENST00000428101 KRTAP6-1Q3LI64 71 aa8.21□□□□□ -1.1
LMO1-202ENST00000428101 KRTAP5-2Q701N4 177 aa8.19□□□□□ -1.1
LMO1-202ENST00000428101 BRK1Q8WUW1 75 aa8.19□□□□□ -1.1
LMO1-202ENST00000428101 KRTAP4-11Q9BYQ6 195 aa8.13□□□□□ -1.11
LMO1-202ENST00000428101 KRTAP9-6A8MVA2 160 aa8.05□□□□□ -1.12
LMO1-202ENST00000428101 KRTAP9-4Q9BYQ2 154 aa7.99□□□□□ -1.13
LMO1-202ENST00000428101 KRTAP6-2Q3LI66 62 aa7.88□□□□□ -1.15
LMO1-202ENST00000428101 KRTAP5-8O75690 187 aa7.87□□□□□ -1.15
LMO1-202ENST00000428101 PMAIP1Q13794 54 aa7.72□□□□□ -1.17
LMO1-202ENST00000428101 OBSCNQ5VST9 7968 aa7.62□□□□□ -1.19
LMO1-202ENST00000428101 MUC5BQ9HC84 5762 aaPredicted RBP7.54□□□□□ -1.2
LMO1-202ENST00000428101 MT3P25713 68 aa7.52□□□□□ -1.21
LMO1-202ENST00000428101 MUC5ACP98088 5654 aa7.5□□□□□ -1.21
LMO1-202ENST00000428101 AHNAKQ09666 5890 aaKnown RBP7.47□□□□□ -1.21
LMO1-202ENST00000428101 KRTAP9-9Q9BYP9 154 aa7.46□□□□□ -1.22
LMO1-202ENST00000428101 KRTAP5-1Q6L8H4 278 aa7.38□□□□□ -1.23
LMO1-202ENST00000428101 PRO0628Q9UI54 55 aa7.38□□□□□ -1.23
LMO1-202ENST00000428101 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
LMO1-202ENST00000428101 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
LMO1-202ENST00000428101 LCE1EQ5T753 118 aa6.96□□□□□ -1.3
LMO1-202ENST00000428101 SVIPQ8NHG7 77 aa6.69□□□□□ -1.34
LMO1-202ENST00000428101 KRTAP4-2Q9BYR5 136 aa6.63□□□□□ -1.35
LMO1-202ENST00000428101 LCE1BQ5T7P3 118 aa6.57□□□□□ -1.36
LMO1-202ENST00000428101 LCE1CQ5T751 118 aa6.47□□□□□ -1.37
LMO1-202ENST00000428101 LUZP6Q538Z0 58 aa6.21□□□□□ -1.42
LMO1-202ENST00000428101 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
LMO1-202ENST00000428101 LCE3DQ9BYE3 92 aa6.05□□□□□ -1.44
LMO1-202ENST00000428101 KRTAP5-11Q6L8G4 156 aa5.88□□□□□ -1.47
LMO1-202ENST00000428101 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.88□□□□□ -1.47
LMO1-202ENST00000428101 LCE1FQ5T754 118 aa5.75□□□□□ -1.49
LMO1-202ENST00000428101 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
LMO1-202ENST00000428101 KRTAP21-2Q3LI59 83 aa5.42□□□□□ -1.54
LMO1-202ENST00000428101 PHGR1C9JFL3 82 aa5.25□□□□□ -1.57
LMO1-202ENST00000428101 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
LMO1-202ENST00000428101 KRTAP4-4Q9BYR3 166 aa4.99□□□□□ -1.61
LMO1-202ENST00000428101 MUC19Q7Z5P9 8384 aa4.69□□□□□ -1.66
LMO1-202ENST00000428101 PRM1P04553 51 aa4.44□□□□□ -1.7
LMO1-202ENST00000428101 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
LMO1-202ENST00000428101 INE1O15225 51 aa4.26□□□□□ -1.73
LMO1-202ENST00000428101 KRTAP21-1Q3LI58 79 aa3.98□□□□□ -1.77
LMO1-202ENST00000428101 MUC16Q8WXI7 14507 aa3.34□□□□□ -1.87
LMO1-202ENST00000428101 H3BS24 57 aa3.34□□□□□ -1.87
Retrieved 77 of 20,778 RNA–protein pairs in 83.1 ms