RNA–Protein interactions for RNA: ENST00000427800.2

CBX8-203, Transcript of chromobox 8, humanhuman

TSL 2

Gene CBX8, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-203ENST00000427800 PSPHP1O15172 72 aa6.9□□□□□ -1.3
CBX8-203ENST00000427800 K7ERS5 55 aa6.89□□□□□ -1.31
CBX8-203ENST00000427800 MT1MQ8N339 61 aa6.86□□□□□ -1.31
CBX8-203ENST00000427800 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
CBX8-203ENST00000427800 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
CBX8-203ENST00000427800 KRTAP12-3P60328 96 aa6.78□□□□□ -1.32
CBX8-203ENST00000427800 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
CBX8-203ENST00000427800 A6NED7 52 aa6.7□□□□□ -1.34
CBX8-203ENST00000427800 PCP4P48539 62 aa6.65□□□□□ -1.34
CBX8-203ENST00000427800 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
CBX8-203ENST00000427800 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
CBX8-203ENST00000427800 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
CBX8-203ENST00000427800 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
CBX8-203ENST00000427800 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
CBX8-203ENST00000427800 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
CBX8-203ENST00000427800 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
CBX8-203ENST00000427800 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
CBX8-203ENST00000427800 KRTAP5-4Q6L8H1 288 aa6.5□□□□□ -1.37
CBX8-203ENST00000427800 MT4P47944 62 aa6.44□□□□□ -1.38
CBX8-203ENST00000427800 ROMO1P60602 79 aa6.41□□□□□ -1.38
CBX8-203ENST00000427800 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
CBX8-203ENST00000427800 KRTAP5-5Q701N2 237 aaPredicted RBP6.29□□□□□ -1.4
CBX8-203ENST00000427800 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
CBX8-203ENST00000427800 HMCN1Q96RW7 5635 aa6.27□□□□□ -1.41
CBX8-203ENST00000427800 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
CBX8-203ENST00000427800 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
CBX8-203ENST00000427800 GPR98Q8WXG9 6306 aa6.13□□□□□ -1.43
CBX8-203ENST00000427800 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
CBX8-203ENST00000427800 KRTAP12-4P60329 112 aa6.12□□□□□ -1.43
CBX8-203ENST00000427800 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
CBX8-203ENST00000427800 KRTAP5-10Q6L8G5 202 aa6.01□□□□□ -1.45
CBX8-203ENST00000427800 AHNAK2Q8IVF2 5795 aa5.94□□□□□ -1.46
CBX8-203ENST00000427800 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
CBX8-203ENST00000427800 MT1AP04731 61 aa5.9□□□□□ -1.46
CBX8-203ENST00000427800 SYNE1Q8NF91 8797 aaKnown RBP5.9□□□□□ -1.47
CBX8-203ENST00000427800 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
CBX8-203ENST00000427800 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
CBX8-203ENST00000427800 KRTAP6-1Q3LI64 71 aa5.83□□□□□ -1.48
CBX8-203ENST00000427800 KRTAP5-7Q6L8G8 165 aa5.77□□□□□ -1.49
CBX8-203ENST00000427800 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
CBX8-203ENST00000427800 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
CBX8-203ENST00000427800 KRTAP6-2Q3LI66 62 aa5.55□□□□□ -1.52
CBX8-203ENST00000427800 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
CBX8-203ENST00000427800 PMAIP1Q13794 54 aa5.52□□□□□ -1.53
CBX8-203ENST00000427800 MT3P25713 68 aa5.41□□□□□ -1.54
CBX8-203ENST00000427800 KRTAP5-8O75690 187 aa5.35□□□□□ -1.55
CBX8-203ENST00000427800 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
CBX8-203ENST00000427800 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
CBX8-203ENST00000427800 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
CBX8-203ENST00000427800 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
CBX8-203ENST00000427800 KRTAP9-9Q9BYP9 154 aa5.07□□□□□ -1.6
CBX8-203ENST00000427800 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
CBX8-203ENST00000427800 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
CBX8-203ENST00000427800 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
CBX8-203ENST00000427800 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
CBX8-203ENST00000427800 AHNAKQ09666 5890 aaKnown RBP4.76□□□□□ -1.65
CBX8-203ENST00000427800 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
CBX8-203ENST00000427800 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
CBX8-203ENST00000427800 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
CBX8-203ENST00000427800 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
CBX8-203ENST00000427800 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
CBX8-203ENST00000427800 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
CBX8-203ENST00000427800 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
CBX8-203ENST00000427800 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
CBX8-203ENST00000427800 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
CBX8-203ENST00000427800 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
CBX8-203ENST00000427800 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
CBX8-203ENST00000427800 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
CBX8-203ENST00000427800 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
CBX8-203ENST00000427800 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
CBX8-203ENST00000427800 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
CBX8-203ENST00000427800 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
CBX8-203ENST00000427800 PRM1P04553 51 aa3.26□□□□□ -1.89
CBX8-203ENST00000427800 INE1O15225 51 aa3.2□□□□□ -1.9
CBX8-203ENST00000427800 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
CBX8-203ENST00000427800 H3BS24 57 aa3.14□□□□□ -1.91
CBX8-203ENST00000427800 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CBX8-203ENST00000427800 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 77.6 ms