RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
TPTE-201ENST00000427445 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
TPTE-201ENST00000427445 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
TPTE-201ENST00000427445 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
TPTE-201ENST00000427445 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
TPTE-201ENST00000427445 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
TPTE-201ENST00000427445 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
TPTE-201ENST00000427445 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
TPTE-201ENST00000427445 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
TPTE-201ENST00000427445 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
TPTE-201ENST00000427445 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
TPTE-201ENST00000427445 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
TPTE-201ENST00000427445 MT1LQ93083 61 aa3.41□□□□□ -1.86
TPTE-201ENST00000427445 MT1EP04732 61 aa3.39□□□□□ -1.87
TPTE-201ENST00000427445 USH2AO75445 5202 aa3.33□□□□□ -1.88
TPTE-201ENST00000427445 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
TPTE-201ENST00000427445 KMT2DO14686 5537 aa3.28□□□□□ -1.88
TPTE-201ENST00000427445 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
TPTE-201ENST00000427445 MT1GP13640 62 aa3.2□□□□□ -1.9
TPTE-201ENST00000427445 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
TPTE-201ENST00000427445 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
TPTE-201ENST00000427445 MT1MQ8N339 61 aa3.16□□□□□ -1.9
TPTE-201ENST00000427445 CRCT1Q9UGL9 99 aa3.16□□□□□ -1.9
TPTE-201ENST00000427445 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
TPTE-201ENST00000427445 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
TPTE-201ENST00000427445 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
TPTE-201ENST00000427445 MT1AP04731 61 aa3□□□□□ -1.93
TPTE-201ENST00000427445 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
TPTE-201ENST00000427445 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
TPTE-201ENST00000427445 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
TPTE-201ENST00000427445 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
TPTE-201ENST00000427445 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.94
TPTE-201ENST00000427445 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
TPTE-201ENST00000427445 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
TPTE-201ENST00000427445 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
TPTE-201ENST00000427445 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
TPTE-201ENST00000427445 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
TPTE-201ENST00000427445 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
TPTE-201ENST00000427445 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
TPTE-201ENST00000427445 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
TPTE-201ENST00000427445 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
TPTE-201ENST00000427445 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
TPTE-201ENST00000427445 PRM1P04553 51 aa2.68□□□□□ -1.98
TPTE-201ENST00000427445 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
TPTE-201ENST00000427445 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
TPTE-201ENST00000427445 DSTQ03001 7570 aaKnown RBP2.67□□□□□ -1.98
TPTE-201ENST00000427445 SPRR2EP22531 72 aa2.66□□□□□ -1.98
TPTE-201ENST00000427445 SPRR2BP35325 72 aa2.66□□□□□ -1.98
TPTE-201ENST00000427445 SPRR2AP35326 72 aa2.66□□□□□ -1.98
TPTE-201ENST00000427445 NEBP20929 6669 aa2.64□□□□□ -1.99
TPTE-201ENST00000427445 MT3P25713 68 aa2.62□□□□□ -1.99
TPTE-201ENST00000427445 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
TPTE-201ENST00000427445 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
TPTE-201ENST00000427445 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
TPTE-201ENST00000427445 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -2
TPTE-201ENST00000427445 SPRR2DP22532 72 aa2.56□□□□□ -2
TPTE-201ENST00000427445 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
TPTE-201ENST00000427445 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
TPTE-201ENST00000427445 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.03
TPTE-201ENST00000427445 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
TPTE-201ENST00000427445 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
TPTE-201ENST00000427445 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
TPTE-201ENST00000427445 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
TPTE-201ENST00000427445 MT4P47944 62 aa2.17□□□□□ -2.06
TPTE-201ENST00000427445 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
TPTE-201ENST00000427445 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.07
TPTE-201ENST00000427445 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
TPTE-201ENST00000427445 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
TPTE-201ENST00000427445 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
TPTE-201ENST00000427445 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
TPTE-201ENST00000427445 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
TPTE-201ENST00000427445 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
TPTE-201ENST00000427445 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
TPTE-201ENST00000427445 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
TPTE-201ENST00000427445 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
TPTE-201ENST00000427445 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
TPTE-201ENST00000427445 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 120.4 ms