RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 KMT2DO14686 5537 aa3.07□□□□□ -1.92
SH3D19-204ENST00000427414 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
SH3D19-204ENST00000427414 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
SH3D19-204ENST00000427414 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
SH3D19-204ENST00000427414 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
SH3D19-204ENST00000427414 MT1LQ93083 61 aa3.02□□□□□ -1.93
SH3D19-204ENST00000427414 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
SH3D19-204ENST00000427414 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
SH3D19-204ENST00000427414 SYNE2Q8WXH0 6885 aaKnown RBP2.98□□□□□ -1.93
SH3D19-204ENST00000427414 MT1GP13640 62 aa2.98□□□□□ -1.93
SH3D19-204ENST00000427414 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
SH3D19-204ENST00000427414 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
SH3D19-204ENST00000427414 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
SH3D19-204ENST00000427414 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
SH3D19-204ENST00000427414 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
SH3D19-204ENST00000427414 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
SH3D19-204ENST00000427414 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
SH3D19-204ENST00000427414 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
SH3D19-204ENST00000427414 MT1MQ8N339 61 aa2.88□□□□□ -1.95
SH3D19-204ENST00000427414 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
SH3D19-204ENST00000427414 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SH3D19-204ENST00000427414 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
SH3D19-204ENST00000427414 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
SH3D19-204ENST00000427414 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
SH3D19-204ENST00000427414 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
SH3D19-204ENST00000427414 SPRR2EP22531 72 aa2.76□□□□□ -1.97
SH3D19-204ENST00000427414 SPRR2BP35325 72 aa2.76□□□□□ -1.97
SH3D19-204ENST00000427414 SPRR2AP35326 72 aa2.76□□□□□ -1.97
SH3D19-204ENST00000427414 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
SH3D19-204ENST00000427414 NEBP20929 6669 aa2.73□□□□□ -1.97
SH3D19-204ENST00000427414 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
SH3D19-204ENST00000427414 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
SH3D19-204ENST00000427414 SPRR2DP22532 72 aa2.67□□□□□ -1.98
SH3D19-204ENST00000427414 KRTAP12-4P60329 112 aa2.65□□□□□ -1.98
SH3D19-204ENST00000427414 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
SH3D19-204ENST00000427414 LCE3BQ5TA77 95 aa2.62□□□□□ -1.99
SH3D19-204ENST00000427414 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
SH3D19-204ENST00000427414 MT1AP04731 61 aa2.61□□□□□ -1.99
SH3D19-204ENST00000427414 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
SH3D19-204ENST00000427414 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2.01
SH3D19-204ENST00000427414 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
SH3D19-204ENST00000427414 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
SH3D19-204ENST00000427414 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
SH3D19-204ENST00000427414 LCE1DQ5T752 114 aa2.46□□□□□ -2.01
SH3D19-204ENST00000427414 KRTAP4-9Q9BYQ8 210 aa2.46□□□□□ -2.01
SH3D19-204ENST00000427414 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
SH3D19-204ENST00000427414 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
SH3D19-204ENST00000427414 MT3P25713 68 aa2.41□□□□□ -2.02
SH3D19-204ENST00000427414 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
SH3D19-204ENST00000427414 PRM1P04553 51 aa2.36□□□□□ -2.03
SH3D19-204ENST00000427414 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
SH3D19-204ENST00000427414 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
SH3D19-204ENST00000427414 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
SH3D19-204ENST00000427414 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
SH3D19-204ENST00000427414 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
SH3D19-204ENST00000427414 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
SH3D19-204ENST00000427414 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
SH3D19-204ENST00000427414 MT4P47944 62 aa2.24□□□□□ -2.05
SH3D19-204ENST00000427414 KRTAP4-2Q9BYR5 136 aa2.22□□□□□ -2.05
SH3D19-204ENST00000427414 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
SH3D19-204ENST00000427414 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
SH3D19-204ENST00000427414 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
SH3D19-204ENST00000427414 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
SH3D19-204ENST00000427414 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
SH3D19-204ENST00000427414 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
SH3D19-204ENST00000427414 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
SH3D19-204ENST00000427414 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
SH3D19-204ENST00000427414 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
SH3D19-204ENST00000427414 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
SH3D19-204ENST00000427414 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
SH3D19-204ENST00000427414 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
SH3D19-204ENST00000427414 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
SH3D19-204ENST00000427414 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SH3D19-204ENST00000427414 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
SH3D19-204ENST00000427414 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
SH3D19-204ENST00000427414 KRTAP4-4Q9BYR3 166 aa1.42□□□□□ -2.18
SH3D19-204ENST00000427414 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 79 ms