RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
HDLBP-214ENST00000427183 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
HDLBP-214ENST00000427183 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
HDLBP-214ENST00000427183 MT4P47944 62 aa3.96□□□□□ -1.78
HDLBP-214ENST00000427183 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
HDLBP-214ENST00000427183 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
HDLBP-214ENST00000427183 MT1LQ93083 61 aa3.91□□□□□ -1.78
HDLBP-214ENST00000427183 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.79
HDLBP-214ENST00000427183 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
HDLBP-214ENST00000427183 MT3P25713 68 aa3.86□□□□□ -1.79
HDLBP-214ENST00000427183 MT1EP04732 61 aa3.84□□□□□ -1.79
HDLBP-214ENST00000427183 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
HDLBP-214ENST00000427183 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
HDLBP-214ENST00000427183 MT1MQ8N339 61 aa3.76□□□□□ -1.81
HDLBP-214ENST00000427183 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
HDLBP-214ENST00000427183 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
HDLBP-214ENST00000427183 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.81
HDLBP-214ENST00000427183 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
HDLBP-214ENST00000427183 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
HDLBP-214ENST00000427183 USH2AO75445 5202 aa3.6□□□□□ -1.83
HDLBP-214ENST00000427183 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
HDLBP-214ENST00000427183 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
HDLBP-214ENST00000427183 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
HDLBP-214ENST00000427183 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
HDLBP-214ENST00000427183 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
HDLBP-214ENST00000427183 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
HDLBP-214ENST00000427183 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
HDLBP-214ENST00000427183 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
HDLBP-214ENST00000427183 MT1AP04731 61 aa3.5□□□□□ -1.85
HDLBP-214ENST00000427183 KMT2DO14686 5537 aa3.47□□□□□ -1.85
HDLBP-214ENST00000427183 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
HDLBP-214ENST00000427183 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
HDLBP-214ENST00000427183 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
HDLBP-214ENST00000427183 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
HDLBP-214ENST00000427183 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
HDLBP-214ENST00000427183 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
HDLBP-214ENST00000427183 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
HDLBP-214ENST00000427183 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
HDLBP-214ENST00000427183 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
HDLBP-214ENST00000427183 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
HDLBP-214ENST00000427183 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
HDLBP-214ENST00000427183 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
HDLBP-214ENST00000427183 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
HDLBP-214ENST00000427183 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
HDLBP-214ENST00000427183 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
HDLBP-214ENST00000427183 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
HDLBP-214ENST00000427183 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
HDLBP-214ENST00000427183 NEBP20929 6669 aa3.01□□□□□ -1.93
HDLBP-214ENST00000427183 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
HDLBP-214ENST00000427183 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
HDLBP-214ENST00000427183 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
HDLBP-214ENST00000427183 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
HDLBP-214ENST00000427183 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
HDLBP-214ENST00000427183 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
HDLBP-214ENST00000427183 MDN1Q9NU22 5596 aa2.76□□□□□ -1.97
HDLBP-214ENST00000427183 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
HDLBP-214ENST00000427183 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
HDLBP-214ENST00000427183 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
HDLBP-214ENST00000427183 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
HDLBP-214ENST00000427183 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
HDLBP-214ENST00000427183 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
HDLBP-214ENST00000427183 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
HDLBP-214ENST00000427183 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
HDLBP-214ENST00000427183 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
HDLBP-214ENST00000427183 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
HDLBP-214ENST00000427183 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
HDLBP-214ENST00000427183 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
HDLBP-214ENST00000427183 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
HDLBP-214ENST00000427183 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
HDLBP-214ENST00000427183 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
HDLBP-214ENST00000427183 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
HDLBP-214ENST00000427183 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
HDLBP-214ENST00000427183 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
HDLBP-214ENST00000427183 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
HDLBP-214ENST00000427183 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
HDLBP-214ENST00000427183 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
HDLBP-214ENST00000427183 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 99.1 ms