RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
SNX17-202ENST00000427123 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
SNX17-202ENST00000427123 INE1O15225 51 aa6.53□□□□□ -1.36
SNX17-202ENST00000427123 KRTAP19-3Q7Z4W3 81 aa6.42□□□□□ -1.38
SNX17-202ENST00000427123 KRTAP2-3P0C7H8 128 aa6.41□□□□□ -1.38
SNX17-202ENST00000427123 KRTAP2-4Q9BYR9 128 aa6.41□□□□□ -1.38
SNX17-202ENST00000427123 KRTAP2-1Q9BYU5 128 aa6.41□□□□□ -1.38
SNX17-202ENST00000427123 MT1GP13640 62 aa6.38□□□□□ -1.39
SNX17-202ENST00000427123 MT1MQ8N339 61 aa6.37□□□□□ -1.39
SNX17-202ENST00000427123 KRTAP4-3Q9BYR4 195 aa6.31□□□□□ -1.4
SNX17-202ENST00000427123 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
SNX17-202ENST00000427123 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
SNX17-202ENST00000427123 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
SNX17-202ENST00000427123 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
SNX17-202ENST00000427123 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
SNX17-202ENST00000427123 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
SNX17-202ENST00000427123 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
SNX17-202ENST00000427123 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
SNX17-202ENST00000427123 KRTAP6-3Q3LI67 103 aa6.03□□□□□ -1.44
SNX17-202ENST00000427123 KRTAP5-9P26371 169 aa5.97□□□□□ -1.45
SNX17-202ENST00000427123 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.47
SNX17-202ENST00000427123 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
SNX17-202ENST00000427123 SPRR2EP22531 72 aa5.79□□□□□ -1.48
SNX17-202ENST00000427123 SPRR2BP35325 72 aa5.79□□□□□ -1.48
SNX17-202ENST00000427123 SPRR2AP35326 72 aa5.79□□□□□ -1.48
SNX17-202ENST00000427123 DSTQ03001 7570 aaKnown RBP5.75□□□□□ -1.49
SNX17-202ENST00000427123 NEBP20929 6669 aa5.74□□□□□ -1.49
SNX17-202ENST00000427123 MT1AP04731 61 aa5.72□□□□□ -1.49
SNX17-202ENST00000427123 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
SNX17-202ENST00000427123 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
SNX17-202ENST00000427123 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
SNX17-202ENST00000427123 SPRR2DP22532 72 aa5.56□□□□□ -1.52
SNX17-202ENST00000427123 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
SNX17-202ENST00000427123 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
SNX17-202ENST00000427123 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
SNX17-202ENST00000427123 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
SNX17-202ENST00000427123 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
SNX17-202ENST00000427123 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
SNX17-202ENST00000427123 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
SNX17-202ENST00000427123 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
SNX17-202ENST00000427123 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
SNX17-202ENST00000427123 MT3P25713 68 aa5.14□□□□□ -1.59
SNX17-202ENST00000427123 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
SNX17-202ENST00000427123 PRM1P04553 51 aa4.89□□□□□ -1.63
SNX17-202ENST00000427123 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
SNX17-202ENST00000427123 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
SNX17-202ENST00000427123 MT4P47944 62 aa4.83□□□□□ -1.64
SNX17-202ENST00000427123 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
SNX17-202ENST00000427123 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
SNX17-202ENST00000427123 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
SNX17-202ENST00000427123 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
SNX17-202ENST00000427123 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
SNX17-202ENST00000427123 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
SNX17-202ENST00000427123 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
SNX17-202ENST00000427123 GPR98Q8WXG9 6306 aa4.3□□□□□ -1.72
SNX17-202ENST00000427123 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
SNX17-202ENST00000427123 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
SNX17-202ENST00000427123 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
SNX17-202ENST00000427123 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
SNX17-202ENST00000427123 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
SNX17-202ENST00000427123 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
SNX17-202ENST00000427123 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
SNX17-202ENST00000427123 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
SNX17-202ENST00000427123 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
SNX17-202ENST00000427123 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
SNX17-202ENST00000427123 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
SNX17-202ENST00000427123 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
SNX17-202ENST00000427123 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
SNX17-202ENST00000427123 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
SNX17-202ENST00000427123 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
SNX17-202ENST00000427123 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
SNX17-202ENST00000427123 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
SNX17-202ENST00000427123 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
SNX17-202ENST00000427123 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
SNX17-202ENST00000427123 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
SNX17-202ENST00000427123 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
SNX17-202ENST00000427123 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
SNX17-202ENST00000427123 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 201.3 ms