RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 PP632Q6XCG6 107 aa6.15□□□□□ -1.43
LMCD1-204ENST00000426878 MT1LQ93083 61 aa6.15□□□□□ -1.43
LMCD1-204ENST00000426878 DSTQ03001 7570 aaKnown RBP6.13□□□□□ -1.43
LMCD1-204ENST00000426878 K7ERS5 55 aa6.13□□□□□ -1.43
LMCD1-204ENST00000426878 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
LMCD1-204ENST00000426878 MT1MQ8N339 61 aa6.08□□□□□ -1.44
LMCD1-204ENST00000426878 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
LMCD1-204ENST00000426878 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
LMCD1-204ENST00000426878 A6NED7 52 aa6□□□□□ -1.45
LMCD1-204ENST00000426878 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
LMCD1-204ENST00000426878 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.47
LMCD1-204ENST00000426878 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
LMCD1-204ENST00000426878 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
LMCD1-204ENST00000426878 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
LMCD1-204ENST00000426878 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
LMCD1-204ENST00000426878 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
LMCD1-204ENST00000426878 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
LMCD1-204ENST00000426878 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
LMCD1-204ENST00000426878 ROMO1P60602 79 aa5.74□□□□□ -1.49
LMCD1-204ENST00000426878 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
LMCD1-204ENST00000426878 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
LMCD1-204ENST00000426878 MT4P47944 62 aa5.68□□□□□ -1.5
LMCD1-204ENST00000426878 GPR98Q8WXG9 6306 aa5.64□□□□□ -1.51
LMCD1-204ENST00000426878 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
LMCD1-204ENST00000426878 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
LMCD1-204ENST00000426878 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
LMCD1-204ENST00000426878 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
LMCD1-204ENST00000426878 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
LMCD1-204ENST00000426878 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
LMCD1-204ENST00000426878 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
LMCD1-204ENST00000426878 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
LMCD1-204ENST00000426878 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.55
LMCD1-204ENST00000426878 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
LMCD1-204ENST00000426878 PRO0628Q9UI54 55 aa5.31□□□□□ -1.56
LMCD1-204ENST00000426878 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
LMCD1-204ENST00000426878 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
LMCD1-204ENST00000426878 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
LMCD1-204ENST00000426878 MT1AP04731 61 aa5.23□□□□□ -1.57
LMCD1-204ENST00000426878 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
LMCD1-204ENST00000426878 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
LMCD1-204ENST00000426878 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
LMCD1-204ENST00000426878 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
LMCD1-204ENST00000426878 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
LMCD1-204ENST00000426878 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
LMCD1-204ENST00000426878 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
LMCD1-204ENST00000426878 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
LMCD1-204ENST00000426878 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
LMCD1-204ENST00000426878 MT3P25713 68 aa4.79□□□□□ -1.64
LMCD1-204ENST00000426878 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
LMCD1-204ENST00000426878 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
LMCD1-204ENST00000426878 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
LMCD1-204ENST00000426878 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
LMCD1-204ENST00000426878 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
LMCD1-204ENST00000426878 H3BS24 57 aa4.46□□□□□ -1.69
LMCD1-204ENST00000426878 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
LMCD1-204ENST00000426878 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
LMCD1-204ENST00000426878 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
LMCD1-204ENST00000426878 LCE1EQ5T753 118 aa4.4□□□□□ -1.7
LMCD1-204ENST00000426878 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
LMCD1-204ENST00000426878 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
LMCD1-204ENST00000426878 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
LMCD1-204ENST00000426878 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
LMCD1-204ENST00000426878 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
LMCD1-204ENST00000426878 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
LMCD1-204ENST00000426878 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
LMCD1-204ENST00000426878 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
LMCD1-204ENST00000426878 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
LMCD1-204ENST00000426878 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
LMCD1-204ENST00000426878 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
LMCD1-204ENST00000426878 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
LMCD1-204ENST00000426878 INE1O15225 51 aa3.18□□□□□ -1.9
LMCD1-204ENST00000426878 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
LMCD1-204ENST00000426878 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
LMCD1-204ENST00000426878 PRM1P04553 51 aa2.93□□□□□ -1.94
LMCD1-204ENST00000426878 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
LMCD1-204ENST00000426878 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
LMCD1-204ENST00000426878 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 80.6 ms