RNA–Protein interactions for RNA: ENST00000426713.1

LINC00116-202, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LINC00116, Length 461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-202ENST00000426713 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
LINC00116-202ENST00000426713 SPINT4Q6UDR6 99 aa5.14□□□□□ -1.59
LINC00116-202ENST00000426713 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
LINC00116-202ENST00000426713 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
LINC00116-202ENST00000426713 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
LINC00116-202ENST00000426713 SMIM26A0A096LP01 95 aa5.03□□□□□ -1.6
LINC00116-202ENST00000426713 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
LINC00116-202ENST00000426713 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
LINC00116-202ENST00000426713 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
LINC00116-202ENST00000426713 Q1T7F1 81 aa5.01□□□□□ -1.61
LINC00116-202ENST00000426713 KRTAP12-4P60329 112 aa5□□□□□ -1.61
LINC00116-202ENST00000426713 SEC61GP60059 68 aa4.99□□□□□ -1.61
LINC00116-202ENST00000426713 A0A1B0GU69 56 aa4.98□□□□□ -1.61
LINC00116-202ENST00000426713 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
LINC00116-202ENST00000426713 V9GYY9 64 aa4.97□□□□□ -1.61
LINC00116-202ENST00000426713 PRR15LQ9BU68 103 aa4.93□□□□□ -1.62
LINC00116-202ENST00000426713 A0A1B0GU33 70 aa4.92□□□□□ -1.62
LINC00116-202ENST00000426713 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
LINC00116-202ENST00000426713 TNP1P09430 55 aa4.91□□□□□ -1.62
LINC00116-202ENST00000426713 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.62
LINC00116-202ENST00000426713 PSPHP1O15172 72 aa4.87□□□□□ -1.63
LINC00116-202ENST00000426713 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
LINC00116-202ENST00000426713 UQCR11O14957 56 aa4.81□□□□□ -1.64
LINC00116-202ENST00000426713 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
LINC00116-202ENST00000426713 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
LINC00116-202ENST00000426713 A8MU10 97 aa4.74□□□□□ -1.65
LINC00116-202ENST00000426713 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
LINC00116-202ENST00000426713 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
LINC00116-202ENST00000426713 A6NED7 52 aa4.71□□□□□ -1.66
LINC00116-202ENST00000426713 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
LINC00116-202ENST00000426713 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
LINC00116-202ENST00000426713 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
LINC00116-202ENST00000426713 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
LINC00116-202ENST00000426713 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
LINC00116-202ENST00000426713 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
LINC00116-202ENST00000426713 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
LINC00116-202ENST00000426713 K7ERS5 55 aa4.52□□□□□ -1.69
LINC00116-202ENST00000426713 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
LINC00116-202ENST00000426713 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
LINC00116-202ENST00000426713 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
LINC00116-202ENST00000426713 MT1AP04731 61 aa4.47□□□□□ -1.69
LINC00116-202ENST00000426713 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
LINC00116-202ENST00000426713 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
LINC00116-202ENST00000426713 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
LINC00116-202ENST00000426713 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
LINC00116-202ENST00000426713 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
LINC00116-202ENST00000426713 ROMO1P60602 79 aa4.34□□□□□ -1.71
LINC00116-202ENST00000426713 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
LINC00116-202ENST00000426713 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
LINC00116-202ENST00000426713 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
LINC00116-202ENST00000426713 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
LINC00116-202ENST00000426713 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
LINC00116-202ENST00000426713 MT3P25713 68 aa4.14□□□□□ -1.75
LINC00116-202ENST00000426713 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
LINC00116-202ENST00000426713 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
LINC00116-202ENST00000426713 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
LINC00116-202ENST00000426713 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
LINC00116-202ENST00000426713 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
LINC00116-202ENST00000426713 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
LINC00116-202ENST00000426713 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
LINC00116-202ENST00000426713 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
LINC00116-202ENST00000426713 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
LINC00116-202ENST00000426713 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
LINC00116-202ENST00000426713 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
LINC00116-202ENST00000426713 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
LINC00116-202ENST00000426713 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
LINC00116-202ENST00000426713 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
LINC00116-202ENST00000426713 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
LINC00116-202ENST00000426713 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
LINC00116-202ENST00000426713 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
LINC00116-202ENST00000426713 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
LINC00116-202ENST00000426713 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
LINC00116-202ENST00000426713 INE1O15225 51 aa2.56□□□□□ -2
LINC00116-202ENST00000426713 H3BS24 57 aa2.51□□□□□ -2.01
LINC00116-202ENST00000426713 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
LINC00116-202ENST00000426713 PRM1P04553 51 aa2.24□□□□□ -2.05
LINC00116-202ENST00000426713 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 107.9 ms