RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 MT1LQ93083 61 aa5.18□□□□□ -1.58
NCKIPSD-205ENST00000426678 MT1MQ8N339 61 aa5.15□□□□□ -1.59
NCKIPSD-205ENST00000426678 K7ERS5 55 aa5.14□□□□□ -1.59
NCKIPSD-205ENST00000426678 PSPHP1O15172 72 aa5.14□□□□□ -1.59
NCKIPSD-205ENST00000426678 Q1T7F1 81 aa5.11□□□□□ -1.59
NCKIPSD-205ENST00000426678 DSTQ03001 7570 aaKnown RBP5.11□□□□□ -1.59
NCKIPSD-205ENST00000426678 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
NCKIPSD-205ENST00000426678 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
NCKIPSD-205ENST00000426678 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
NCKIPSD-205ENST00000426678 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
NCKIPSD-205ENST00000426678 A6NED7 52 aa4.99□□□□□ -1.61
NCKIPSD-205ENST00000426678 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
NCKIPSD-205ENST00000426678 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
NCKIPSD-205ENST00000426678 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
NCKIPSD-205ENST00000426678 MT4P47944 62 aa4.9□□□□□ -1.63
NCKIPSD-205ENST00000426678 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
NCKIPSD-205ENST00000426678 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
NCKIPSD-205ENST00000426678 CDC42SE1Q9NRR8 79 aa4.86□□□□□ -1.63
NCKIPSD-205ENST00000426678 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
NCKIPSD-205ENST00000426678 HMCN1Q96RW7 5635 aa4.84□□□□□ -1.64
NCKIPSD-205ENST00000426678 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
NCKIPSD-205ENST00000426678 GPR98Q8WXG9 6306 aa4.78□□□□□ -1.64
NCKIPSD-205ENST00000426678 ROMO1P60602 79 aa4.76□□□□□ -1.65
NCKIPSD-205ENST00000426678 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
NCKIPSD-205ENST00000426678 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
NCKIPSD-205ENST00000426678 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
NCKIPSD-205ENST00000426678 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
NCKIPSD-205ENST00000426678 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.67
NCKIPSD-205ENST00000426678 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
NCKIPSD-205ENST00000426678 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
NCKIPSD-205ENST00000426678 KRTAP20-2Q3LI61 65 aa4.59□□□□□ -1.67
NCKIPSD-205ENST00000426678 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
NCKIPSD-205ENST00000426678 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
NCKIPSD-205ENST00000426678 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
NCKIPSD-205ENST00000426678 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
NCKIPSD-205ENST00000426678 MT1AP04731 61 aa4.42□□□□□ -1.7
NCKIPSD-205ENST00000426678 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
NCKIPSD-205ENST00000426678 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
NCKIPSD-205ENST00000426678 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
NCKIPSD-205ENST00000426678 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
NCKIPSD-205ENST00000426678 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
NCKIPSD-205ENST00000426678 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
NCKIPSD-205ENST00000426678 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
NCKIPSD-205ENST00000426678 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
NCKIPSD-205ENST00000426678 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
NCKIPSD-205ENST00000426678 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
NCKIPSD-205ENST00000426678 MT3P25713 68 aa4.05□□□□□ -1.76
NCKIPSD-205ENST00000426678 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
NCKIPSD-205ENST00000426678 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
NCKIPSD-205ENST00000426678 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
NCKIPSD-205ENST00000426678 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
NCKIPSD-205ENST00000426678 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
NCKIPSD-205ENST00000426678 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
NCKIPSD-205ENST00000426678 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
NCKIPSD-205ENST00000426678 H3BS24 57 aa3.79□□□□□ -1.8
NCKIPSD-205ENST00000426678 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
NCKIPSD-205ENST00000426678 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
NCKIPSD-205ENST00000426678 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
NCKIPSD-205ENST00000426678 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
NCKIPSD-205ENST00000426678 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
NCKIPSD-205ENST00000426678 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
NCKIPSD-205ENST00000426678 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
NCKIPSD-205ENST00000426678 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
NCKIPSD-205ENST00000426678 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
NCKIPSD-205ENST00000426678 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
NCKIPSD-205ENST00000426678 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
NCKIPSD-205ENST00000426678 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
NCKIPSD-205ENST00000426678 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
NCKIPSD-205ENST00000426678 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
NCKIPSD-205ENST00000426678 LCE1FQ5T754 118 aa3□□□□□ -1.93
NCKIPSD-205ENST00000426678 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
NCKIPSD-205ENST00000426678 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
NCKIPSD-205ENST00000426678 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
NCKIPSD-205ENST00000426678 INE1O15225 51 aa2.61□□□□□ -1.99
NCKIPSD-205ENST00000426678 PRM1P04553 51 aa2.43□□□□□ -2.02
NCKIPSD-205ENST00000426678 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
NCKIPSD-205ENST00000426678 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
NCKIPSD-205ENST00000426678 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms