RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 MT1EP04732 61 aa5.9□□□□□ -1.47
RARA-206ENST00000425707 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
RARA-206ENST00000425707 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.47
RARA-206ENST00000425707 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
RARA-206ENST00000425707 MACF1Q9UPN3 7388 aaKnown RBP5.73□□□□□ -1.49
RARA-206ENST00000425707 SYNE2Q8WXH0 6885 aaKnown RBP5.66□□□□□ -1.5
RARA-206ENST00000425707 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
RARA-206ENST00000425707 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
RARA-206ENST00000425707 MT1GP13640 62 aa5.5□□□□□ -1.53
RARA-206ENST00000425707 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
RARA-206ENST00000425707 MT1MQ8N339 61 aa5.49□□□□□ -1.53
RARA-206ENST00000425707 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
RARA-206ENST00000425707 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
RARA-206ENST00000425707 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
RARA-206ENST00000425707 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
RARA-206ENST00000425707 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
RARA-206ENST00000425707 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
RARA-206ENST00000425707 MDN1Q9NU22 5596 aa5.32□□□□□ -1.56
RARA-206ENST00000425707 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
RARA-206ENST00000425707 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
RARA-206ENST00000425707 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
RARA-206ENST00000425707 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
RARA-206ENST00000425707 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
RARA-206ENST00000425707 MT1AP04731 61 aa5.21□□□□□ -1.57
RARA-206ENST00000425707 KRTAP5-9P26371 169 aa5.12□□□□□ -1.59
RARA-206ENST00000425707 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
RARA-206ENST00000425707 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
RARA-206ENST00000425707 SPRR2EP22531 72 aa5.07□□□□□ -1.6
RARA-206ENST00000425707 SPRR2BP35325 72 aa5.07□□□□□ -1.6
RARA-206ENST00000425707 SPRR2AP35326 72 aa5.07□□□□□ -1.6
RARA-206ENST00000425707 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
RARA-206ENST00000425707 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
RARA-206ENST00000425707 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
RARA-206ENST00000425707 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
RARA-206ENST00000425707 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
RARA-206ENST00000425707 NEBP20929 6669 aa4.92□□□□□ -1.62
RARA-206ENST00000425707 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
RARA-206ENST00000425707 SPRR2DP22532 72 aa4.87□□□□□ -1.63
RARA-206ENST00000425707 PRM1P04553 51 aa4.75□□□□□ -1.65
RARA-206ENST00000425707 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
RARA-206ENST00000425707 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
RARA-206ENST00000425707 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
RARA-206ENST00000425707 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
RARA-206ENST00000425707 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
RARA-206ENST00000425707 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
RARA-206ENST00000425707 MT3P25713 68 aa4.49□□□□□ -1.69
RARA-206ENST00000425707 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
RARA-206ENST00000425707 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
RARA-206ENST00000425707 MT4P47944 62 aa4.36□□□□□ -1.71
RARA-206ENST00000425707 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
RARA-206ENST00000425707 HMCN1Q96RW7 5635 aa4.24□□□□□ -1.73
RARA-206ENST00000425707 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
RARA-206ENST00000425707 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
RARA-206ENST00000425707 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
RARA-206ENST00000425707 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
RARA-206ENST00000425707 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
RARA-206ENST00000425707 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
RARA-206ENST00000425707 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
RARA-206ENST00000425707 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
RARA-206ENST00000425707 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
RARA-206ENST00000425707 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
RARA-206ENST00000425707 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
RARA-206ENST00000425707 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
RARA-206ENST00000425707 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
RARA-206ENST00000425707 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
RARA-206ENST00000425707 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
RARA-206ENST00000425707 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
RARA-206ENST00000425707 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
RARA-206ENST00000425707 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
RARA-206ENST00000425707 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
RARA-206ENST00000425707 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.88
RARA-206ENST00000425707 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
RARA-206ENST00000425707 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
RARA-206ENST00000425707 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
RARA-206ENST00000425707 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
RARA-206ENST00000425707 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
RARA-206ENST00000425707 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 70.7 ms