RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
LINC00839-201ENST00000424751 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
LINC00839-201ENST00000424751 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
LINC00839-201ENST00000424751 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
LINC00839-201ENST00000424751 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.58
LINC00839-201ENST00000424751 MT1EP04732 61 aa5.12□□□□□ -1.59
LINC00839-201ENST00000424751 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
LINC00839-201ENST00000424751 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.59
LINC00839-201ENST00000424751 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
LINC00839-201ENST00000424751 SPRR2FQ96RM1 72 aa5.04□□□□□ -1.6
LINC00839-201ENST00000424751 MT1LQ93083 61 aa5.02□□□□□ -1.61
LINC00839-201ENST00000424751 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
LINC00839-201ENST00000424751 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
LINC00839-201ENST00000424751 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
LINC00839-201ENST00000424751 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
LINC00839-201ENST00000424751 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
LINC00839-201ENST00000424751 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.63
LINC00839-201ENST00000424751 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
LINC00839-201ENST00000424751 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.63
LINC00839-201ENST00000424751 KRTAP2-1Q9BYU5 128 aa4.9□□□□□ -1.63
LINC00839-201ENST00000424751 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
LINC00839-201ENST00000424751 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
LINC00839-201ENST00000424751 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
LINC00839-201ENST00000424751 MT1MQ8N339 61 aa4.83□□□□□ -1.64
LINC00839-201ENST00000424751 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
LINC00839-201ENST00000424751 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
LINC00839-201ENST00000424751 MT1GP13640 62 aa4.76□□□□□ -1.65
LINC00839-201ENST00000424751 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
LINC00839-201ENST00000424751 SPRR2EP22531 72 aa4.75□□□□□ -1.65
LINC00839-201ENST00000424751 SPRR2BP35325 72 aa4.75□□□□□ -1.65
LINC00839-201ENST00000424751 SPRR2AP35326 72 aa4.75□□□□□ -1.65
LINC00839-201ENST00000424751 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
LINC00839-201ENST00000424751 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
LINC00839-201ENST00000424751 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
LINC00839-201ENST00000424751 NEBP20929 6669 aa4.58□□□□□ -1.68
LINC00839-201ENST00000424751 SPRR2DP22532 72 aa4.55□□□□□ -1.68
LINC00839-201ENST00000424751 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
LINC00839-201ENST00000424751 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
LINC00839-201ENST00000424751 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
LINC00839-201ENST00000424751 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
LINC00839-201ENST00000424751 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
LINC00839-201ENST00000424751 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
LINC00839-201ENST00000424751 MT1AP04731 61 aa4.19□□□□□ -1.74
LINC00839-201ENST00000424751 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
LINC00839-201ENST00000424751 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
LINC00839-201ENST00000424751 MT4P47944 62 aa4.07□□□□□ -1.76
LINC00839-201ENST00000424751 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
LINC00839-201ENST00000424751 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
LINC00839-201ENST00000424751 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
LINC00839-201ENST00000424751 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
LINC00839-201ENST00000424751 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
LINC00839-201ENST00000424751 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
LINC00839-201ENST00000424751 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
LINC00839-201ENST00000424751 PRM1P04553 51 aa3.89□□□□□ -1.79
LINC00839-201ENST00000424751 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
LINC00839-201ENST00000424751 MT3P25713 68 aa3.75□□□□□ -1.81
LINC00839-201ENST00000424751 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
LINC00839-201ENST00000424751 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
LINC00839-201ENST00000424751 LCE1EQ5T753 118 aa3.46□□□□□ -1.85
LINC00839-201ENST00000424751 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
LINC00839-201ENST00000424751 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
LINC00839-201ENST00000424751 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
LINC00839-201ENST00000424751 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
LINC00839-201ENST00000424751 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
LINC00839-201ENST00000424751 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
LINC00839-201ENST00000424751 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
LINC00839-201ENST00000424751 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
LINC00839-201ENST00000424751 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
LINC00839-201ENST00000424751 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
LINC00839-201ENST00000424751 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
LINC00839-201ENST00000424751 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
LINC00839-201ENST00000424751 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
LINC00839-201ENST00000424751 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
LINC00839-201ENST00000424751 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
LINC00839-201ENST00000424751 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
LINC00839-201ENST00000424751 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
LINC00839-201ENST00000424751 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
LINC00839-201ENST00000424751 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 60.5 ms