RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 SPRR2AP35326 72 aa2.72□□□□□ -1.97
LSM8-204ENST00000424702 KRTAP6-3Q3LI67 103 aa2.72□□□□□ -1.97
LSM8-204ENST00000424702 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
LSM8-204ENST00000424702 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
LSM8-204ENST00000424702 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
LSM8-204ENST00000424702 FSIP2Q5CZC0 6907 aa2.67□□□□□ -1.98
LSM8-204ENST00000424702 USH2AO75445 5202 aa2.67□□□□□ -1.98
LSM8-204ENST00000424702 SPRR2DP22532 72 aa2.65□□□□□ -1.98
LSM8-204ENST00000424702 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
LSM8-204ENST00000424702 LCE5AQ5TCM9 118 aa2.62□□□□□ -1.99
LSM8-204ENST00000424702 MT1GP13640 62 aa2.62□□□□□ -1.99
LSM8-204ENST00000424702 MT1EP04732 61 aa2.59□□□□□ -1.99
LSM8-204ENST00000424702 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
LSM8-204ENST00000424702 KRTAP4-9Q9BYQ8 210 aa2.58□□□□□ -2
LSM8-204ENST00000424702 LCE1AQ5T7P2 110 aa2.58□□□□□ -2
LSM8-204ENST00000424702 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
LSM8-204ENST00000424702 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
LSM8-204ENST00000424702 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
LSM8-204ENST00000424702 SSPOA2VEC9 5147 aa2.55□□□□□ -2
LSM8-204ENST00000424702 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
LSM8-204ENST00000424702 LCE3BQ5TA77 95 aa2.54□□□□□ -2
LSM8-204ENST00000424702 KRTAP5-9P26371 169 aa2.54□□□□□ -2
LSM8-204ENST00000424702 INE1O15225 51 aa2.53□□□□□ -2
LSM8-204ENST00000424702 MT1LQ93083 61 aa2.53□□□□□ -2
LSM8-204ENST00000424702 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
LSM8-204ENST00000424702 FCGBPQ9Y6R7 5405 aaPredicted RBP2.52□□□□□ -2.01
LSM8-204ENST00000424702 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
LSM8-204ENST00000424702 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
LSM8-204ENST00000424702 MT3P25713 68 aa2.47□□□□□ -2.01
LSM8-204ENST00000424702 MT1MQ8N339 61 aa2.47□□□□□ -2.01
LSM8-204ENST00000424702 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
LSM8-204ENST00000424702 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
LSM8-204ENST00000424702 KMT2DO14686 5537 aa2.46□□□□□ -2.02
LSM8-204ENST00000424702 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
LSM8-204ENST00000424702 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
LSM8-204ENST00000424702 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
LSM8-204ENST00000424702 NEBP20929 6669 aa2.37□□□□□ -2.03
LSM8-204ENST00000424702 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
LSM8-204ENST00000424702 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
LSM8-204ENST00000424702 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
LSM8-204ENST00000424702 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
LSM8-204ENST00000424702 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
LSM8-204ENST00000424702 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
LSM8-204ENST00000424702 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
LSM8-204ENST00000424702 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
LSM8-204ENST00000424702 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
LSM8-204ENST00000424702 MT4P47944 62 aa2.28□□□□□ -2.04
LSM8-204ENST00000424702 MT1AP04731 61 aa2.25□□□□□ -2.05
LSM8-204ENST00000424702 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
LSM8-204ENST00000424702 DSTQ03001 7570 aaKnown RBP2.18□□□□□ -2.06
LSM8-204ENST00000424702 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
LSM8-204ENST00000424702 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
LSM8-204ENST00000424702 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
LSM8-204ENST00000424702 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
LSM8-204ENST00000424702 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
LSM8-204ENST00000424702 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
LSM8-204ENST00000424702 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
LSM8-204ENST00000424702 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
LSM8-204ENST00000424702 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
LSM8-204ENST00000424702 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
LSM8-204ENST00000424702 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
LSM8-204ENST00000424702 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
LSM8-204ENST00000424702 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
LSM8-204ENST00000424702 PRM1P04553 51 aa1.74□□□□□ -2.13
LSM8-204ENST00000424702 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
LSM8-204ENST00000424702 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
LSM8-204ENST00000424702 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
LSM8-204ENST00000424702 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
LSM8-204ENST00000424702 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
LSM8-204ENST00000424702 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
LSM8-204ENST00000424702 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
LSM8-204ENST00000424702 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
LSM8-204ENST00000424702 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
LSM8-204ENST00000424702 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
LSM8-204ENST00000424702 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
LSM8-204ENST00000424702 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
LSM8-204ENST00000424702 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 68.3 ms