RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
PRNP-202ENST00000424424 MT1GP13640 62 aa6.74□□□□□ -1.33
PRNP-202ENST00000424424 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
PRNP-202ENST00000424424 PCP4P48539 62 aa6.66□□□□□ -1.34
PRNP-202ENST00000424424 MT1LQ93083 61 aa6.65□□□□□ -1.34
PRNP-202ENST00000424424 A6NED7 52 aa6.64□□□□□ -1.35
PRNP-202ENST00000424424 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
PRNP-202ENST00000424424 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
PRNP-202ENST00000424424 MT1MQ8N339 61 aa6.59□□□□□ -1.35
PRNP-202ENST00000424424 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
PRNP-202ENST00000424424 KRTAP4-9Q9BYQ8 210 aa6.56□□□□□ -1.36
PRNP-202ENST00000424424 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
PRNP-202ENST00000424424 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
PRNP-202ENST00000424424 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
PRNP-202ENST00000424424 LCE1DQ5T752 114 aa6.38□□□□□ -1.39
PRNP-202ENST00000424424 HMCN1Q96RW7 5635 aa6.32□□□□□ -1.4
PRNP-202ENST00000424424 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
PRNP-202ENST00000424424 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
PRNP-202ENST00000424424 ROMO1P60602 79 aa6.3□□□□□ -1.4
PRNP-202ENST00000424424 AHNAK2Q8IVF2 5795 aa6.27□□□□□ -1.41
PRNP-202ENST00000424424 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
PRNP-202ENST00000424424 MT4P47944 62 aa6.22□□□□□ -1.41
PRNP-202ENST00000424424 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
PRNP-202ENST00000424424 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
PRNP-202ENST00000424424 KRTAP5-10Q6L8G5 202 aa6.15□□□□□ -1.42
PRNP-202ENST00000424424 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
PRNP-202ENST00000424424 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
PRNP-202ENST00000424424 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
PRNP-202ENST00000424424 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
PRNP-202ENST00000424424 KRTAP5-7Q6L8G8 165 aa5.98□□□□□ -1.45
PRNP-202ENST00000424424 KRTAP5-3Q6L8H2 238 aa5.91□□□□□ -1.46
PRNP-202ENST00000424424 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
PRNP-202ENST00000424424 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
PRNP-202ENST00000424424 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
PRNP-202ENST00000424424 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
PRNP-202ENST00000424424 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
PRNP-202ENST00000424424 MT1AP04731 61 aa5.68□□□□□ -1.5
PRNP-202ENST00000424424 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
PRNP-202ENST00000424424 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
PRNP-202ENST00000424424 PMAIP1Q13794 54 aa5.52□□□□□ -1.53
PRNP-202ENST00000424424 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
PRNP-202ENST00000424424 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
PRNP-202ENST00000424424 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
PRNP-202ENST00000424424 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
PRNP-202ENST00000424424 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
PRNP-202ENST00000424424 AHNAKQ09666 5890 aaKnown RBP5.25□□□□□ -1.57
PRNP-202ENST00000424424 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
PRNP-202ENST00000424424 MT3P25713 68 aa5.22□□□□□ -1.57
PRNP-202ENST00000424424 MUC5ACP98088 5654 aa5.22□□□□□ -1.57
PRNP-202ENST00000424424 MUC5BQ9HC84 5762 aaPredicted RBP5.21□□□□□ -1.58
PRNP-202ENST00000424424 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
PRNP-202ENST00000424424 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
PRNP-202ENST00000424424 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
PRNP-202ENST00000424424 H3BS24 57 aa5.03□□□□□ -1.6
PRNP-202ENST00000424424 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
PRNP-202ENST00000424424 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
PRNP-202ENST00000424424 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
PRNP-202ENST00000424424 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
PRNP-202ENST00000424424 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
PRNP-202ENST00000424424 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
PRNP-202ENST00000424424 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
PRNP-202ENST00000424424 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
PRNP-202ENST00000424424 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
PRNP-202ENST00000424424 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
PRNP-202ENST00000424424 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
PRNP-202ENST00000424424 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
PRNP-202ENST00000424424 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
PRNP-202ENST00000424424 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
PRNP-202ENST00000424424 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
PRNP-202ENST00000424424 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
PRNP-202ENST00000424424 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
PRNP-202ENST00000424424 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
PRNP-202ENST00000424424 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
PRNP-202ENST00000424424 PRM1P04553 51 aa3.22□□□□□ -1.89
PRNP-202ENST00000424424 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
PRNP-202ENST00000424424 INE1O15225 51 aa2.99□□□□□ -1.93
PRNP-202ENST00000424424 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
PRNP-202ENST00000424424 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 266.2 ms