RNA–Protein interactions for RNA: ENST00000423898.1

SMIM12-202, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-202ENST00000423898 HMCN1Q96RW7 5635 aa7.31□□□□□ -1.24
SMIM12-202ENST00000423898 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
SMIM12-202ENST00000423898 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
SMIM12-202ENST00000423898 KRTAP5-4Q6L8H1 288 aa7.21□□□□□ -1.26
SMIM12-202ENST00000423898 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
SMIM12-202ENST00000423898 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
SMIM12-202ENST00000423898 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
SMIM12-202ENST00000423898 UQCR11O14957 56 aa7.11□□□□□ -1.27
SMIM12-202ENST00000423898 AHNAK2Q8IVF2 5795 aa7.11□□□□□ -1.27
SMIM12-202ENST00000423898 TMEM258P61165 79 aa7.03□□□□□ -1.28
SMIM12-202ENST00000423898 KRTAP5-10Q6L8G5 202 aa6.98□□□□□ -1.29
SMIM12-202ENST00000423898 MIR22HGQ0VDD5 57 aa6.95□□□□□ -1.3
SMIM12-202ENST00000423898 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
SMIM12-202ENST00000423898 KRTAP5-5Q701N2 237 aaPredicted RBP6.87□□□□□ -1.31
SMIM12-202ENST00000423898 K7ERS5 55 aa6.86□□□□□ -1.31
SMIM12-202ENST00000423898 KRTAP20-2Q3LI61 65 aa6.85□□□□□ -1.31
SMIM12-202ENST00000423898 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
SMIM12-202ENST00000423898 KRTAP5-3Q6L8H2 238 aa6.79□□□□□ -1.32
SMIM12-202ENST00000423898 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
SMIM12-202ENST00000423898 KRTAP12-4P60329 112 aa6.76□□□□□ -1.33
SMIM12-202ENST00000423898 PSPHP1O15172 72 aa6.74□□□□□ -1.33
SMIM12-202ENST00000423898 KRTAP5-7Q6L8G8 165 aa6.72□□□□□ -1.33
SMIM12-202ENST00000423898 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
SMIM12-202ENST00000423898 V9GYY9 64 aa6.69□□□□□ -1.34
SMIM12-202ENST00000423898 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
SMIM12-202ENST00000423898 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
SMIM12-202ENST00000423898 SYNE1Q8NF91 8797 aaKnown RBP6.62□□□□□ -1.35
SMIM12-202ENST00000423898 Q1T7F1 81 aa6.62□□□□□ -1.35
SMIM12-202ENST00000423898 LCE3CQ5T5A8 94 aa6.59□□□□□ -1.35
SMIM12-202ENST00000423898 A6NED7 52 aa6.51□□□□□ -1.37
SMIM12-202ENST00000423898 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
SMIM12-202ENST00000423898 MT1AP04731 61 aa6.37□□□□□ -1.39
SMIM12-202ENST00000423898 KRTAP6-1Q3LI64 71 aa6.36□□□□□ -1.39
SMIM12-202ENST00000423898 ROMO1P60602 79 aa6.34□□□□□ -1.39
SMIM12-202ENST00000423898 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
SMIM12-202ENST00000423898 KRTAP5-2Q701N4 177 aa6.3□□□□□ -1.4
SMIM12-202ENST00000423898 KRTAP4-11Q9BYQ6 195 aa6.28□□□□□ -1.4
SMIM12-202ENST00000423898 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
SMIM12-202ENST00000423898 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
SMIM12-202ENST00000423898 KRTAP6-2Q3LI66 62 aa6.11□□□□□ -1.43
SMIM12-202ENST00000423898 KRTAP5-8O75690 187 aa6.06□□□□□ -1.44
SMIM12-202ENST00000423898 OBSCNQ5VST9 7968 aa5.95□□□□□ -1.46
SMIM12-202ENST00000423898 MUC5ACP98088 5654 aa5.84□□□□□ -1.47
SMIM12-202ENST00000423898 MT3P25713 68 aa5.84□□□□□ -1.47
SMIM12-202ENST00000423898 PCP4P48539 62 aa5.83□□□□□ -1.48
SMIM12-202ENST00000423898 MUC5BQ9HC84 5762 aaPredicted RBP5.83□□□□□ -1.48
SMIM12-202ENST00000423898 AHNAKQ09666 5890 aaKnown RBP5.82□□□□□ -1.48
SMIM12-202ENST00000423898 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
SMIM12-202ENST00000423898 KRTAP5-1Q6L8H4 278 aa5.68□□□□□ -1.5
SMIM12-202ENST00000423898 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
SMIM12-202ENST00000423898 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
SMIM12-202ENST00000423898 LCE1BQ5T7P3 118 aa5.14□□□□□ -1.59
SMIM12-202ENST00000423898 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
SMIM12-202ENST00000423898 PMAIP1Q13794 54 aa5.01□□□□□ -1.61
SMIM12-202ENST00000423898 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
SMIM12-202ENST00000423898 PRAC1Q96KF2 57 aa4.92□□□□□ -1.62
SMIM12-202ENST00000423898 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
SMIM12-202ENST00000423898 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
SMIM12-202ENST00000423898 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
SMIM12-202ENST00000423898 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.51□□□□□ -1.69
SMIM12-202ENST00000423898 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
SMIM12-202ENST00000423898 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
SMIM12-202ENST00000423898 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
SMIM12-202ENST00000423898 KTN1-AS1Q86SY8 53 aa4.3□□□□□ -1.72
SMIM12-202ENST00000423898 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
SMIM12-202ENST00000423898 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
SMIM12-202ENST00000423898 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
SMIM12-202ENST00000423898 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
SMIM12-202ENST00000423898 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
SMIM12-202ENST00000423898 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
SMIM12-202ENST00000423898 PRM1P04553 51 aa3.25□□□□□ -1.89
SMIM12-202ENST00000423898 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
SMIM12-202ENST00000423898 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.91
SMIM12-202ENST00000423898 H3BS24 57 aa2.77□□□□□ -1.97
SMIM12-202ENST00000423898 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
SMIM12-202ENST00000423898 A0A0A0MQY5 61 aa2.53□□□□□ -2
SMIM12-202ENST00000423898 INE1O15225 51 aa2.39□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 71.2 ms