RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
ERCC1-204ENST00000423698 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
ERCC1-204ENST00000423698 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
ERCC1-204ENST00000423698 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
ERCC1-204ENST00000423698 MT1LQ93083 61 aa4.03□□□□□ -1.76
ERCC1-204ENST00000423698 MT1EP04732 61 aa4.02□□□□□ -1.77
ERCC1-204ENST00000423698 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
ERCC1-204ENST00000423698 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
ERCC1-204ENST00000423698 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
ERCC1-204ENST00000423698 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
ERCC1-204ENST00000423698 MT1GP13640 62 aa3.97□□□□□ -1.77
ERCC1-204ENST00000423698 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
ERCC1-204ENST00000423698 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
ERCC1-204ENST00000423698 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.8
ERCC1-204ENST00000423698 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
ERCC1-204ENST00000423698 MT1MQ8N339 61 aa3.78□□□□□ -1.8
ERCC1-204ENST00000423698 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
ERCC1-204ENST00000423698 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
ERCC1-204ENST00000423698 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
ERCC1-204ENST00000423698 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
ERCC1-204ENST00000423698 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
ERCC1-204ENST00000423698 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
ERCC1-204ENST00000423698 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
ERCC1-204ENST00000423698 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
ERCC1-204ENST00000423698 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
ERCC1-204ENST00000423698 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
ERCC1-204ENST00000423698 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
ERCC1-204ENST00000423698 SPRR2EP22531 72 aa3.49□□□□□ -1.85
ERCC1-204ENST00000423698 SPRR2BP35325 72 aa3.49□□□□□ -1.85
ERCC1-204ENST00000423698 SPRR2AP35326 72 aa3.49□□□□□ -1.85
ERCC1-204ENST00000423698 PRM1P04553 51 aa3.45□□□□□ -1.86
ERCC1-204ENST00000423698 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
ERCC1-204ENST00000423698 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
ERCC1-204ENST00000423698 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
ERCC1-204ENST00000423698 SPRR2DP22532 72 aa3.33□□□□□ -1.88
ERCC1-204ENST00000423698 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
ERCC1-204ENST00000423698 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ERCC1-204ENST00000423698 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
ERCC1-204ENST00000423698 MT1AP04731 61 aa3.29□□□□□ -1.88
ERCC1-204ENST00000423698 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
ERCC1-204ENST00000423698 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
ERCC1-204ENST00000423698 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
ERCC1-204ENST00000423698 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
ERCC1-204ENST00000423698 NEBP20929 6669 aa3.14□□□□□ -1.91
ERCC1-204ENST00000423698 MT4P47944 62 aa3.09□□□□□ -1.91
ERCC1-204ENST00000423698 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
ERCC1-204ENST00000423698 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
ERCC1-204ENST00000423698 MT3P25713 68 aa3□□□□□ -1.93
ERCC1-204ENST00000423698 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
ERCC1-204ENST00000423698 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
ERCC1-204ENST00000423698 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
ERCC1-204ENST00000423698 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
ERCC1-204ENST00000423698 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
ERCC1-204ENST00000423698 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
ERCC1-204ENST00000423698 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
ERCC1-204ENST00000423698 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
ERCC1-204ENST00000423698 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
ERCC1-204ENST00000423698 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
ERCC1-204ENST00000423698 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
ERCC1-204ENST00000423698 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
ERCC1-204ENST00000423698 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
ERCC1-204ENST00000423698 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
ERCC1-204ENST00000423698 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
ERCC1-204ENST00000423698 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
ERCC1-204ENST00000423698 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
ERCC1-204ENST00000423698 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
ERCC1-204ENST00000423698 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
ERCC1-204ENST00000423698 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
ERCC1-204ENST00000423698 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
ERCC1-204ENST00000423698 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
ERCC1-204ENST00000423698 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
ERCC1-204ENST00000423698 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
ERCC1-204ENST00000423698 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
ERCC1-204ENST00000423698 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
ERCC1-204ENST00000423698 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
ERCC1-204ENST00000423698 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
ERCC1-204ENST00000423698 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 1018.3 ms