RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.73
PTPRN-204ENST00000423636 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
PTPRN-204ENST00000423636 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
PTPRN-204ENST00000423636 MT1EP04732 61 aa4.15□□□□□ -1.74
PTPRN-204ENST00000423636 MT1LQ93083 61 aa4.13□□□□□ -1.75
PTPRN-204ENST00000423636 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
PTPRN-204ENST00000423636 LCE2DQ5TA82 110 aaPredicted RBP4.09□□□□□ -1.76
PTPRN-204ENST00000423636 MT1GP13640 62 aa4.07□□□□□ -1.76
PTPRN-204ENST00000423636 INE1O15225 51 aa4.05□□□□□ -1.76
PTPRN-204ENST00000423636 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
PTPRN-204ENST00000423636 KRTAP9-2Q9BYQ4 174 aa3.92□□□□□ -1.78
PTPRN-204ENST00000423636 MT1MQ8N339 61 aa3.91□□□□□ -1.78
PTPRN-204ENST00000423636 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
PTPRN-204ENST00000423636 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
PTPRN-204ENST00000423636 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
PTPRN-204ENST00000423636 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
PTPRN-204ENST00000423636 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
PTPRN-204ENST00000423636 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
PTPRN-204ENST00000423636 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
PTPRN-204ENST00000423636 SPRR2EP22531 72 aa3.68□□□□□ -1.82
PTPRN-204ENST00000423636 SPRR2BP35325 72 aa3.68□□□□□ -1.82
PTPRN-204ENST00000423636 SPRR2AP35326 72 aa3.68□□□□□ -1.82
PTPRN-204ENST00000423636 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
PTPRN-204ENST00000423636 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
PTPRN-204ENST00000423636 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
PTPRN-204ENST00000423636 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
PTPRN-204ENST00000423636 SPRR2DP22532 72 aa3.49□□□□□ -1.85
PTPRN-204ENST00000423636 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
PTPRN-204ENST00000423636 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
PTPRN-204ENST00000423636 MT1AP04731 61 aa3.38□□□□□ -1.87
PTPRN-204ENST00000423636 KRTAP9-6A0A140TA67 174 aa3.38□□□□□ -1.87
PTPRN-204ENST00000423636 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
PTPRN-204ENST00000423636 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
PTPRN-204ENST00000423636 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
PTPRN-204ENST00000423636 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
PTPRN-204ENST00000423636 MT4P47944 62 aa3.28□□□□□ -1.88
PTPRN-204ENST00000423636 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
PTPRN-204ENST00000423636 NEBP20929 6669 aa3.26□□□□□ -1.89
PTPRN-204ENST00000423636 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
PTPRN-204ENST00000423636 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.9
PTPRN-204ENST00000423636 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
PTPRN-204ENST00000423636 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
PTPRN-204ENST00000423636 PRM1P04553 51 aa3.14□□□□□ -1.91
PTPRN-204ENST00000423636 MT3P25713 68 aa3.07□□□□□ -1.92
PTPRN-204ENST00000423636 LCE1DQ5T752 114 aa2.96□□□□□ -1.94
PTPRN-204ENST00000423636 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
PTPRN-204ENST00000423636 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
PTPRN-204ENST00000423636 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
PTPRN-204ENST00000423636 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
PTPRN-204ENST00000423636 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
PTPRN-204ENST00000423636 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
PTPRN-204ENST00000423636 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
PTPRN-204ENST00000423636 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
PTPRN-204ENST00000423636 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
PTPRN-204ENST00000423636 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
PTPRN-204ENST00000423636 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
PTPRN-204ENST00000423636 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
PTPRN-204ENST00000423636 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
PTPRN-204ENST00000423636 LCE1FQ5T754 118 aa2.54□□□□□ -2
PTPRN-204ENST00000423636 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
PTPRN-204ENST00000423636 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
PTPRN-204ENST00000423636 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
PTPRN-204ENST00000423636 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
PTPRN-204ENST00000423636 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
PTPRN-204ENST00000423636 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
PTPRN-204ENST00000423636 KRTAP5-8O75690 187 aa2.34□□□□□ -2.04
PTPRN-204ENST00000423636 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
PTPRN-204ENST00000423636 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
PTPRN-204ENST00000423636 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
PTPRN-204ENST00000423636 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
PTPRN-204ENST00000423636 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
PTPRN-204ENST00000423636 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
PTPRN-204ENST00000423636 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
PTPRN-204ENST00000423636 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
PTPRN-204ENST00000423636 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
PTPRN-204ENST00000423636 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
PTPRN-204ENST00000423636 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 40.5 ms