RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
CHCHD3-202ENST00000423635 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
CHCHD3-202ENST00000423635 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
CHCHD3-202ENST00000423635 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
CHCHD3-202ENST00000423635 TNP1P09430 55 aa5.4□□□□□ -1.55
CHCHD3-202ENST00000423635 SPANXA2-OT1Q8N9U9 137 aa5.39□□□□□ -1.55
CHCHD3-202ENST00000423635 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
CHCHD3-202ENST00000423635 SEC61GP60059 68 aa5.37□□□□□ -1.55
CHCHD3-202ENST00000423635 SMIM20Q8N5G0 67 aa5.37□□□□□ -1.55
CHCHD3-202ENST00000423635 A0A1B0GU33 70 aa5.36□□□□□ -1.55
CHCHD3-202ENST00000423635 A0A1B0GV90 55 aa5.36□□□□□ -1.55
CHCHD3-202ENST00000423635 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
CHCHD3-202ENST00000423635 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
CHCHD3-202ENST00000423635 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.55
CHCHD3-202ENST00000423635 SNURFQ9Y675 71 aa5.32□□□□□ -1.56
CHCHD3-202ENST00000423635 MUC5BQ9HC84 5762 aaPredicted RBP5.31□□□□□ -1.56
CHCHD3-202ENST00000423635 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
CHCHD3-202ENST00000423635 J3QR89 54 aa5.29□□□□□ -1.56
CHCHD3-202ENST00000423635 COA5Q86WW8 74 aa5.24□□□□□ -1.57
CHCHD3-202ENST00000423635 KRTAP5-8O75690 187 aa5.23□□□□□ -1.57
CHCHD3-202ENST00000423635 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
CHCHD3-202ENST00000423635 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
CHCHD3-202ENST00000423635 A8MU10 97 aa5.16□□□□□ -1.58
CHCHD3-202ENST00000423635 K7ERU9 68 aa5.11□□□□□ -1.59
CHCHD3-202ENST00000423635 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
CHCHD3-202ENST00000423635 MT1AP04731 61 aa5□□□□□ -1.61
CHCHD3-202ENST00000423635 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
CHCHD3-202ENST00000423635 A0A1B0GU69 56 aa4.99□□□□□ -1.61
CHCHD3-202ENST00000423635 SERP2Q8N6R1 65 aa4.98□□□□□ -1.61
CHCHD3-202ENST00000423635 PCP4P48539 62 aa4.97□□□□□ -1.61
CHCHD3-202ENST00000423635 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
CHCHD3-202ENST00000423635 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
CHCHD3-202ENST00000423635 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
CHCHD3-202ENST00000423635 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
CHCHD3-202ENST00000423635 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
CHCHD3-202ENST00000423635 H7BZZ5 65 aa4.74□□□□□ -1.65
CHCHD3-202ENST00000423635 COX7CP15954 63 aa4.72□□□□□ -1.65
CHCHD3-202ENST00000423635 PRR15LQ9BU68 103 aa4.67□□□□□ -1.66
CHCHD3-202ENST00000423635 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
CHCHD3-202ENST00000423635 MT3P25713 68 aa4.61□□□□□ -1.67
CHCHD3-202ENST00000423635 ANAPC13Q9BS18 74 aa4.6□□□□□ -1.67
CHCHD3-202ENST00000423635 UQCR11O14957 56 aa4.52□□□□□ -1.69
CHCHD3-202ENST00000423635 LINC01558Q9Y6Z2 57 aa4.52□□□□□ -1.69
CHCHD3-202ENST00000423635 ATP5EP56381 51 aaPredicted RBP4.47□□□□□ -1.69
CHCHD3-202ENST00000423635 CCDC179H3BU77 68 aa4.46□□□□□ -1.69
CHCHD3-202ENST00000423635 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
CHCHD3-202ENST00000423635 TMEM258P61165 79 aa4.37□□□□□ -1.71
CHCHD3-202ENST00000423635 K7ERS5 55 aa4.36□□□□□ -1.71
CHCHD3-202ENST00000423635 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
CHCHD3-202ENST00000423635 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
CHCHD3-202ENST00000423635 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
CHCHD3-202ENST00000423635 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.73
CHCHD3-202ENST00000423635 V9GYY9 64 aa4.14□□□□□ -1.75
CHCHD3-202ENST00000423635 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
CHCHD3-202ENST00000423635 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
CHCHD3-202ENST00000423635 Q1T7F1 81 aa4.07□□□□□ -1.76
CHCHD3-202ENST00000423635 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
CHCHD3-202ENST00000423635 PSPHP1O15172 72 aa4.04□□□□□ -1.76
CHCHD3-202ENST00000423635 PRAC1Q96KF2 57 aa4□□□□□ -1.77
CHCHD3-202ENST00000423635 ROMO1P60602 79 aa3.97□□□□□ -1.77
CHCHD3-202ENST00000423635 A6NED7 52 aa3.94□□□□□ -1.78
CHCHD3-202ENST00000423635 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
CHCHD3-202ENST00000423635 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
CHCHD3-202ENST00000423635 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
CHCHD3-202ENST00000423635 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
CHCHD3-202ENST00000423635 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
CHCHD3-202ENST00000423635 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
CHCHD3-202ENST00000423635 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
CHCHD3-202ENST00000423635 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
CHCHD3-202ENST00000423635 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
CHCHD3-202ENST00000423635 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
CHCHD3-202ENST00000423635 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
CHCHD3-202ENST00000423635 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
CHCHD3-202ENST00000423635 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
CHCHD3-202ENST00000423635 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
CHCHD3-202ENST00000423635 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
CHCHD3-202ENST00000423635 INE1O15225 51 aa2.17□□□□□ -2.06
CHCHD3-202ENST00000423635 PRM1P04553 51 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms