RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.02
LINC00458-201ENST00000423442 R4GN34 69 aa2.46□□□□□ -2.02
LINC00458-201ENST00000423442 CHKB-CPT1BH3BT56 60 aa2.45□□□□□ -2.02
LINC00458-201ENST00000423442 DMAC1Q96GE9 116 aa2.45□□□□□ -2.02
LINC00458-201ENST00000423442 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
LINC00458-201ENST00000423442 MT-ATP8P03928 68 aa2.44□□□□□ -2.02
LINC00458-201ENST00000423442 PRO2289Q9P1D8 64 aa2.44□□□□□ -2.02
LINC00458-201ENST00000423442 MT1BP07438 61 aa2.43□□□□□ -2.02
LINC00458-201ENST00000423442 M0QZ58 72 aa2.42□□□□□ -2.02
LINC00458-201ENST00000423442 SPRR2EP22531 72 aa2.42□□□□□ -2.02
LINC00458-201ENST00000423442 SPRR2BP35325 72 aa2.42□□□□□ -2.02
LINC00458-201ENST00000423442 SPRR2AP35326 72 aa2.42□□□□□ -2.02
LINC00458-201ENST00000423442 KRTAP25-1Q3LHN0 102 aa2.42□□□□□ -2.02
LINC00458-201ENST00000423442 LINC01554Q52M75 96 aa2.41□□□□□ -2.02
LINC00458-201ENST00000423442 SPINT4Q6UDR6 99 aa2.39□□□□□ -2.03
LINC00458-201ENST00000423442 SERP2Q8N6R1 65 aa2.39□□□□□ -2.03
LINC00458-201ENST00000423442 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
LINC00458-201ENST00000423442 SNURFQ9Y675 71 aa2.39□□□□□ -2.03
LINC00458-201ENST00000423442 P0C880 135 aa2.38□□□□□ -2.03
LINC00458-201ENST00000423442 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
LINC00458-201ENST00000423442 A0A1B0GU33 70 aa2.36□□□□□ -2.03
LINC00458-201ENST00000423442 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
LINC00458-201ENST00000423442 SPRR2DP22532 72 aa2.34□□□□□ -2.03
LINC00458-201ENST00000423442 SERP1Q9Y6X1 66 aa2.34□□□□□ -2.03
LINC00458-201ENST00000423442 COX7CP15954 63 aa2.3□□□□□ -2.04
LINC00458-201ENST00000423442 MT1XP80297 61 aa2.3□□□□□ -2.04
LINC00458-201ENST00000423442 COA5Q86WW8 74 aa2.29□□□□□ -2.04
LINC00458-201ENST00000423442 KRTAP8-1Q8IUC2 63 aa2.29□□□□□ -2.04
LINC00458-201ENST00000423442 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
LINC00458-201ENST00000423442 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
LINC00458-201ENST00000423442 A0A0D9SG42 100 aa2.24□□□□□ -2.05
LINC00458-201ENST00000423442 A0A1B0GU69 56 aa2.23□□□□□ -2.05
LINC00458-201ENST00000423442 H7BZZ5 65 aa2.23□□□□□ -2.05
LINC00458-201ENST00000423442 SPATA8Q6RVD6 105 aa2.21□□□□□ -2.06
LINC00458-201ENST00000423442 PRR15LQ9BU68 103 aa2.21□□□□□ -2.06
LINC00458-201ENST00000423442 SPRR5A0A1B0GTR4 108 aa2.2□□□□□ -2.06
LINC00458-201ENST00000423442 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
LINC00458-201ENST00000423442 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
LINC00458-201ENST00000423442 ATP5EP56381 51 aaPredicted RBP2.18□□□□□ -2.06
LINC00458-201ENST00000423442 TMEM258P61165 79 aa2.18□□□□□ -2.06
LINC00458-201ENST00000423442 CYSTM1Q9H1C7 97 aa2.18□□□□□ -2.06
LINC00458-201ENST00000423442 CCDC179H3BU77 68 aa2.16□□□□□ -2.06
LINC00458-201ENST00000423442 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
LINC00458-201ENST00000423442 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
LINC00458-201ENST00000423442 LINC01558Q9Y6Z2 57 aa2.11□□□□□ -2.07
LINC00458-201ENST00000423442 UQCR11O14957 56 aa2.1□□□□□ -2.07
LINC00458-201ENST00000423442 TNP1P09430 55 aa2.1□□□□□ -2.07
LINC00458-201ENST00000423442 MT4P47944 62 aa2.09□□□□□ -2.07
LINC00458-201ENST00000423442 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
LINC00458-201ENST00000423442 RPS28P62857 69 aaKnown RBP2.07□□□□□ -2.08
LINC00458-201ENST00000423442 MT1EP04732 61 aa2.04□□□□□ -2.08
LINC00458-201ENST00000423442 MIR22HGQ0VDD5 57 aa2.04□□□□□ -2.08
LINC00458-201ENST00000423442 KRTAP19-5Q3LI72 72 aa2.04□□□□□ -2.08
LINC00458-201ENST00000423442 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
LINC00458-201ENST00000423442 KRTAP19-3Q7Z4W3 81 aa2.04□□□□□ -2.08
LINC00458-201ENST00000423442 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
LINC00458-201ENST00000423442 MT1GP13640 62 aa2.03□□□□□ -2.08
LINC00458-201ENST00000423442 ROMO1P60602 79 aa2□□□□□ -2.09
LINC00458-201ENST00000423442 Q1T7F1 81 aa1.99□□□□□ -2.09
LINC00458-201ENST00000423442 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
LINC00458-201ENST00000423442 MT1LQ93083 61 aa1.96□□□□□ -2.1
LINC00458-201ENST00000423442 MT1MQ8N339 61 aa1.94□□□□□ -2.1
LINC00458-201ENST00000423442 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
LINC00458-201ENST00000423442 CDC42SE1Q9NRR8 79 aa1.92□□□□□ -2.1
LINC00458-201ENST00000423442 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
LINC00458-201ENST00000423442 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
LINC00458-201ENST00000423442 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
LINC00458-201ENST00000423442 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
LINC00458-201ENST00000423442 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
LINC00458-201ENST00000423442 INE1O15225 51 aa1.71□□□□□ -2.14
LINC00458-201ENST00000423442 MT1AP04731 61 aa1.68□□□□□ -2.14
LINC00458-201ENST00000423442 KRTAP6-1Q3LI64 71 aa1.65□□□□□ -2.15
LINC00458-201ENST00000423442 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
LINC00458-201ENST00000423442 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
LINC00458-201ENST00000423442 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
LINC00458-201ENST00000423442 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
LINC00458-201ENST00000423442 PRM1P04553 51 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 122.8 ms