RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 LINC01558Q9Y6Z2 57 aa8.87□□□□□ -0.99
SMDT1-202ENST00000422252 KRTAP4-3Q9BYR4 195 aa8.85□□□□□ -0.99
SMDT1-202ENST00000422252 MT4P47944 62 aa8.83□□□□□ -1
SMDT1-202ENST00000422252 HMCN1Q96RW7 5635 aa8.77□□□□□ -1.01
SMDT1-202ENST00000422252 KRTAP5-4Q6L8H1 288 aa8.72□□□□□ -1.01
SMDT1-202ENST00000422252 UQCR11O14957 56 aa8.69□□□□□ -1.02
SMDT1-202ENST00000422252 KRTAP12-3P60328 96 aa8.69□□□□□ -1.02
SMDT1-202ENST00000422252 TMEM258P61165 79 aa8.65□□□□□ -1.02
SMDT1-202ENST00000422252 KRTAP4-7Q9BYR0 210 aa8.61□□□□□ -1.03
SMDT1-202ENST00000422252 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
SMDT1-202ENST00000422252 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
SMDT1-202ENST00000422252 AHNAK2Q8IVF2 5795 aa8.47□□□□□ -1.05
SMDT1-202ENST00000422252 KRTAP25-1Q3LHN0 102 aa8.47□□□□□ -1.05
SMDT1-202ENST00000422252 KRTAP5-10Q6L8G5 202 aa8.37□□□□□ -1.07
SMDT1-202ENST00000422252 K7ERS5 55 aa8.36□□□□□ -1.07
SMDT1-202ENST00000422252 KRTAP5-5Q701N2 237 aaPredicted RBP8.33□□□□□ -1.08
SMDT1-202ENST00000422252 KRTAP20-2Q3LI61 65 aa8.24□□□□□ -1.09
SMDT1-202ENST00000422252 PSPHP1O15172 72 aa8.23□□□□□ -1.09
SMDT1-202ENST00000422252 V9GYY9 64 aa8.23□□□□□ -1.09
SMDT1-202ENST00000422252 KRTAP19-4Q3LI73 84 aa8.21□□□□□ -1.1
SMDT1-202ENST00000422252 SPRR5A0A1B0GTR4 108 aa8.19□□□□□ -1.1
SMDT1-202ENST00000422252 LOC100996750A0A140TA64 210 aa8.17□□□□□ -1.1
SMDT1-202ENST00000422252 Q1T7F1 81 aa8.16□□□□□ -1.1
SMDT1-202ENST00000422252 KRTAP23-1A1A580 65 aa8.15□□□□□ -1.1
SMDT1-202ENST00000422252 KRTAP12-4P60329 112 aa8.15□□□□□ -1.1
SMDT1-202ENST00000422252 KRTAP5-3Q6L8H2 238 aa8.15□□□□□ -1.1
SMDT1-202ENST00000422252 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
SMDT1-202ENST00000422252 KRTAP5-7Q6L8G8 165 aa8.07□□□□□ -1.12
SMDT1-202ENST00000422252 LCE3CQ5T5A8 94 aa7.99□□□□□ -1.13
SMDT1-202ENST00000422252 SYNE1Q8NF91 8797 aaKnown RBP7.94□□□□□ -1.14
SMDT1-202ENST00000422252 A6NED7 52 aa7.94□□□□□ -1.14
SMDT1-202ENST00000422252 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
SMDT1-202ENST00000422252 ROMO1P60602 79 aa7.75□□□□□ -1.17
SMDT1-202ENST00000422252 MT1AP04731 61 aa7.72□□□□□ -1.17
SMDT1-202ENST00000422252 RPS28P62857 69 aaKnown RBP7.69□□□□□ -1.18
SMDT1-202ENST00000422252 KRTAP6-1Q3LI64 71 aa7.68□□□□□ -1.18
SMDT1-202ENST00000422252 KRTAP5-2Q701N4 177 aa7.62□□□□□ -1.19
SMDT1-202ENST00000422252 KRTAP4-11Q9BYQ6 195 aa7.55□□□□□ -1.2
SMDT1-202ENST00000422252 KRTAP9-6A8MVA2 160 aa7.54□□□□□ -1.2
SMDT1-202ENST00000422252 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
SMDT1-202ENST00000422252 KRTAP6-2Q3LI66 62 aa7.36□□□□□ -1.23
SMDT1-202ENST00000422252 KRTAP5-8O75690 187 aa7.31□□□□□ -1.24
SMDT1-202ENST00000422252 PCP4P48539 62 aa7.23□□□□□ -1.25
SMDT1-202ENST00000422252 MT3P25713 68 aa7.07□□□□□ -1.28
SMDT1-202ENST00000422252 OBSCNQ5VST9 7968 aa7.03□□□□□ -1.28
SMDT1-202ENST00000422252 MUC5BQ9HC84 5762 aaPredicted RBP7□□□□□ -1.29
SMDT1-202ENST00000422252 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
SMDT1-202ENST00000422252 MUC5ACP98088 5654 aa6.95□□□□□ -1.3
SMDT1-202ENST00000422252 AHNAKQ09666 5890 aaKnown RBP6.95□□□□□ -1.3
SMDT1-202ENST00000422252 KRTAP5-1Q6L8H4 278 aa6.85□□□□□ -1.31
SMDT1-202ENST00000422252 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
SMDT1-202ENST00000422252 LCE1EQ5T753 118 aa6.52□□□□□ -1.37
SMDT1-202ENST00000422252 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
SMDT1-202ENST00000422252 KRTAP4-2Q9BYR5 136 aa6.17□□□□□ -1.42
SMDT1-202ENST00000422252 LCE1BQ5T7P3 118 aa6.15□□□□□ -1.42
SMDT1-202ENST00000422252 LCE1CQ5T751 118 aa6.06□□□□□ -1.44
SMDT1-202ENST00000422252 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
SMDT1-202ENST00000422252 LCE3DQ9BYE3 92 aa5.73□□□□□ -1.49
SMDT1-202ENST00000422252 KRTAP4-12Q9BQ66 201 aa5.63□□□□□ -1.51
SMDT1-202ENST00000422252 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
SMDT1-202ENST00000422252 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
SMDT1-202ENST00000422252 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.49□□□□□ -1.53
SMDT1-202ENST00000422252 LCE1FQ5T754 118 aa5.38□□□□□ -1.55
SMDT1-202ENST00000422252 LCE3EQ5T5B0 92 aa5.37□□□□□ -1.55
SMDT1-202ENST00000422252 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
SMDT1-202ENST00000422252 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
SMDT1-202ENST00000422252 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
SMDT1-202ENST00000422252 KRTAP21-2Q3LI59 83 aa5.06□□□□□ -1.6
SMDT1-202ENST00000422252 PHGR1C9JFL3 82 aa4.89□□□□□ -1.63
SMDT1-202ENST00000422252 KRTAP4-4Q9BYR3 166 aa4.65□□□□□ -1.67
SMDT1-202ENST00000422252 MUC19Q7Z5P9 8384 aa4.34□□□□□ -1.71
SMDT1-202ENST00000422252 PRM1P04553 51 aa3.95□□□□□ -1.78
SMDT1-202ENST00000422252 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
SMDT1-202ENST00000422252 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
SMDT1-202ENST00000422252 MUC16Q8WXI7 14507 aa3.12□□□□□ -1.91
SMDT1-202ENST00000422252 INE1O15225 51 aa3.02□□□□□ -1.93
SMDT1-202ENST00000422252 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
SMDT1-202ENST00000422252 H3BS24 57 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 93.1 ms