RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 KRTAP9-6A8MVA2 160 aa2.21□□□□□ -2.06
ATP2C1-203ENST00000422190 MT1EP04732 61 aa2.21□□□□□ -2.06
ATP2C1-203ENST00000422190 KRTAP4-9Q9BYQ8 210 aa2.21□□□□□ -2.06
ATP2C1-203ENST00000422190 MT1LQ93083 61 aa2.2□□□□□ -2.06
ATP2C1-203ENST00000422190 LCE1DQ5T752 114 aa2.18□□□□□ -2.06
ATP2C1-203ENST00000422190 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
ATP2C1-203ENST00000422190 KRTAP9-4Q9BYQ2 154 aa2.17□□□□□ -2.06
ATP2C1-203ENST00000422190 LCE3BQ5TA77 95 aa2.15□□□□□ -2.07
ATP2C1-203ENST00000422190 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
ATP2C1-203ENST00000422190 INE1O15225 51 aa2.13□□□□□ -2.07
ATP2C1-203ENST00000422190 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
ATP2C1-203ENST00000422190 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
ATP2C1-203ENST00000422190 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
ATP2C1-203ENST00000422190 LCE4AQ5TA78 99 aa2.1□□□□□ -2.07
ATP2C1-203ENST00000422190 CRCT1Q9UGL9 99 aa2.09□□□□□ -2.07
ATP2C1-203ENST00000422190 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
ATP2C1-203ENST00000422190 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
ATP2C1-203ENST00000422190 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
ATP2C1-203ENST00000422190 MT1GP13640 62 aa2.08□□□□□ -2.08
ATP2C1-203ENST00000422190 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
ATP2C1-203ENST00000422190 MT1MQ8N339 61 aa2.07□□□□□ -2.08
ATP2C1-203ENST00000422190 SPRR2FQ96RM1 72 aa2.07□□□□□ -2.08
ATP2C1-203ENST00000422190 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
ATP2C1-203ENST00000422190 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.08
ATP2C1-203ENST00000422190 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
ATP2C1-203ENST00000422190 KRTAP4-11Q9BYQ6 195 aa2.01□□□□□ -2.09
ATP2C1-203ENST00000422190 LCE5AQ5TCM9 118 aa2.01□□□□□ -2.09
ATP2C1-203ENST00000422190 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
ATP2C1-203ENST00000422190 KRTAP9-7A8MTY7 169 aa1.97□□□□□ -2.09
ATP2C1-203ENST00000422190 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
ATP2C1-203ENST00000422190 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
ATP2C1-203ENST00000422190 SYNE1Q8NF91 8797 aaKnown RBP1.93□□□□□ -2.1
ATP2C1-203ENST00000422190 LCE1AQ5T7P2 110 aa1.91□□□□□ -2.1
ATP2C1-203ENST00000422190 SPRR2EP22531 72 aa1.89□□□□□ -2.11
ATP2C1-203ENST00000422190 SPRR2BP35325 72 aa1.89□□□□□ -2.11
ATP2C1-203ENST00000422190 SPRR2AP35326 72 aa1.89□□□□□ -2.11
ATP2C1-203ENST00000422190 KRTAP5-9P26371 169 aa1.89□□□□□ -2.11
ATP2C1-203ENST00000422190 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
ATP2C1-203ENST00000422190 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
ATP2C1-203ENST00000422190 MT1AP04731 61 aa1.85□□□□□ -2.11
ATP2C1-203ENST00000422190 SPRR2DP22532 72 aa1.81□□□□□ -2.12
ATP2C1-203ENST00000422190 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
ATP2C1-203ENST00000422190 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
ATP2C1-203ENST00000422190 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
ATP2C1-203ENST00000422190 LCE3DQ9BYE3 92 aa1.77□□□□□ -2.13
ATP2C1-203ENST00000422190 NEBP20929 6669 aa1.74□□□□□ -2.13
ATP2C1-203ENST00000422190 LCE3EQ5T5B0 92 aa1.74□□□□□ -2.13
ATP2C1-203ENST00000422190 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
ATP2C1-203ENST00000422190 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
ATP2C1-203ENST00000422190 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
ATP2C1-203ENST00000422190 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
ATP2C1-203ENST00000422190 MT3P25713 68 aa1.67□□□□□ -2.14
ATP2C1-203ENST00000422190 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
ATP2C1-203ENST00000422190 PRM1P04553 51 aa1.64□□□□□ -2.15
ATP2C1-203ENST00000422190 KRTAP2-2Q9BYT5 123 aa1.64□□□□□ -2.15
ATP2C1-203ENST00000422190 MT4P47944 62 aa1.61□□□□□ -2.15
ATP2C1-203ENST00000422190 KRTAP5-4Q6L8H1 288 aa1.61□□□□□ -2.15
ATP2C1-203ENST00000422190 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
ATP2C1-203ENST00000422190 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
ATP2C1-203ENST00000422190 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
ATP2C1-203ENST00000422190 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
ATP2C1-203ENST00000422190 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
ATP2C1-203ENST00000422190 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
ATP2C1-203ENST00000422190 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
ATP2C1-203ENST00000422190 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
ATP2C1-203ENST00000422190 LCE1EQ5T753 118 aa1.38□□□□□ -2.19
ATP2C1-203ENST00000422190 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
ATP2C1-203ENST00000422190 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
ATP2C1-203ENST00000422190 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
ATP2C1-203ENST00000422190 LCE1CQ5T751 118 aa1.28□□□□□ -2.21
ATP2C1-203ENST00000422190 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
ATP2C1-203ENST00000422190 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
ATP2C1-203ENST00000422190 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
ATP2C1-203ENST00000422190 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
ATP2C1-203ENST00000422190 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
ATP2C1-203ENST00000422190 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
ATP2C1-203ENST00000422190 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 9.8 ms