RNA–Protein interactions for RNA: ENST00000422086.5

TUBA3FP-202, Transcript of tubulin alpha 3f pseudogene, humanhuman

TSL 1 (best) BASIC

Gene TUBA3FP, Length 1,974 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3FP-202ENST00000422086 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
TUBA3FP-202ENST00000422086 A0A0A0MQY5 61 aa6.46□□□□□ -1.38
TUBA3FP-202ENST00000422086 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
TUBA3FP-202ENST00000422086 MT1MQ8N339 61 aa6.42□□□□□ -1.38
TUBA3FP-202ENST00000422086 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
TUBA3FP-202ENST00000422086 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
TUBA3FP-202ENST00000422086 MACF1Q9UPN3 7388 aaKnown RBP6.31□□□□□ -1.4
TUBA3FP-202ENST00000422086 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
TUBA3FP-202ENST00000422086 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
TUBA3FP-202ENST00000422086 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
TUBA3FP-202ENST00000422086 KRTAP2-3P0C7H8 128 aa6.15□□□□□ -1.43
TUBA3FP-202ENST00000422086 KRTAP2-4Q9BYR9 128 aa6.15□□□□□ -1.43
TUBA3FP-202ENST00000422086 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.43
TUBA3FP-202ENST00000422086 KRTAP9-6A0A140TA67 174 aa6.12□□□□□ -1.43
TUBA3FP-202ENST00000422086 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
TUBA3FP-202ENST00000422086 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
TUBA3FP-202ENST00000422086 SPRR2EP22531 72 aa6.09□□□□□ -1.43
TUBA3FP-202ENST00000422086 SPRR2BP35325 72 aa6.09□□□□□ -1.43
TUBA3FP-202ENST00000422086 SPRR2AP35326 72 aa6.09□□□□□ -1.43
TUBA3FP-202ENST00000422086 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
TUBA3FP-202ENST00000422086 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
TUBA3FP-202ENST00000422086 INE1O15225 51 aa6□□□□□ -1.45
TUBA3FP-202ENST00000422086 MDN1Q9NU22 5596 aa5.9□□□□□ -1.46
TUBA3FP-202ENST00000422086 SPRR2DP22532 72 aa5.86□□□□□ -1.47
TUBA3FP-202ENST00000422086 KRTAP4-6Q9BYQ5 205 aa5.78□□□□□ -1.48
TUBA3FP-202ENST00000422086 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
TUBA3FP-202ENST00000422086 MT1AP04731 61 aa5.76□□□□□ -1.49
TUBA3FP-202ENST00000422086 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
TUBA3FP-202ENST00000422086 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
TUBA3FP-202ENST00000422086 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.51
TUBA3FP-202ENST00000422086 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
TUBA3FP-202ENST00000422086 NEBP20929 6669 aa5.46□□□□□ -1.53
TUBA3FP-202ENST00000422086 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
TUBA3FP-202ENST00000422086 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
TUBA3FP-202ENST00000422086 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
TUBA3FP-202ENST00000422086 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
TUBA3FP-202ENST00000422086 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
TUBA3FP-202ENST00000422086 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
TUBA3FP-202ENST00000422086 MT3P25713 68 aa5.22□□□□□ -1.57
TUBA3FP-202ENST00000422086 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.58
TUBA3FP-202ENST00000422086 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
TUBA3FP-202ENST00000422086 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
TUBA3FP-202ENST00000422086 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
TUBA3FP-202ENST00000422086 KRTAP20-1Q3LI63 56 aa5.07□□□□□ -1.6
TUBA3FP-202ENST00000422086 MT4P47944 62 aa5.04□□□□□ -1.6
TUBA3FP-202ENST00000422086 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
TUBA3FP-202ENST00000422086 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
TUBA3FP-202ENST00000422086 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
TUBA3FP-202ENST00000422086 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
TUBA3FP-202ENST00000422086 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
TUBA3FP-202ENST00000422086 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
TUBA3FP-202ENST00000422086 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
TUBA3FP-202ENST00000422086 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
TUBA3FP-202ENST00000422086 PRM1P04553 51 aa4.57□□□□□ -1.68
TUBA3FP-202ENST00000422086 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
TUBA3FP-202ENST00000422086 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
TUBA3FP-202ENST00000422086 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
TUBA3FP-202ENST00000422086 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
TUBA3FP-202ENST00000422086 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
TUBA3FP-202ENST00000422086 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
TUBA3FP-202ENST00000422086 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
TUBA3FP-202ENST00000422086 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
TUBA3FP-202ENST00000422086 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
TUBA3FP-202ENST00000422086 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
TUBA3FP-202ENST00000422086 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
TUBA3FP-202ENST00000422086 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
TUBA3FP-202ENST00000422086 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
TUBA3FP-202ENST00000422086 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
TUBA3FP-202ENST00000422086 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
TUBA3FP-202ENST00000422086 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
TUBA3FP-202ENST00000422086 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
TUBA3FP-202ENST00000422086 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.89
TUBA3FP-202ENST00000422086 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
TUBA3FP-202ENST00000422086 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
TUBA3FP-202ENST00000422086 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
TUBA3FP-202ENST00000422086 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
TUBA3FP-202ENST00000422086 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms