RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 PP632Q6XCG6 107 aa9.42□□□□□ -0.9
CDK9-202ENST00000421939 MT1LQ93083 61 aa9.42□□□□□ -0.9
CDK9-202ENST00000421939 DSTQ03001 7570 aaKnown RBP9.4□□□□□ -0.9
CDK9-202ENST00000421939 K7ERS5 55 aa9.36□□□□□ -0.91
CDK9-202ENST00000421939 MT1MQ8N339 61 aa9.34□□□□□ -0.91
CDK9-202ENST00000421939 RPS28P62857 69 aaKnown RBP9.32□□□□□ -0.92
CDK9-202ENST00000421939 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
CDK9-202ENST00000421939 KRTAP12-3P60328 96 aa9.23□□□□□ -0.93
CDK9-202ENST00000421939 A6NED7 52 aa9.18□□□□□ -0.94
CDK9-202ENST00000421939 KRTAP4-3Q9BYR4 195 aa9.1□□□□□ -0.95
CDK9-202ENST00000421939 KRTAP4-9Q9BYQ8 210 aa9.04□□□□□ -0.96
CDK9-202ENST00000421939 KRTAP4-7Q9BYR0 210 aa8.95□□□□□ -0.98
CDK9-202ENST00000421939 LCE4AQ5TA78 99 aa8.92□□□□□ -0.98
CDK9-202ENST00000421939 KRTAP23-1A1A580 65 aa8.9□□□□□ -0.98
CDK9-202ENST00000421939 CDC42SE1Q9NRR8 79 aa8.89□□□□□ -0.99
CDK9-202ENST00000421939 LCE1DQ5T752 114 aa8.88□□□□□ -0.99
CDK9-202ENST00000421939 HMCN1Q96RW7 5635 aa8.82□□□□□ -1
CDK9-202ENST00000421939 MT4P47944 62 aa8.79□□□□□ -1
CDK9-202ENST00000421939 KRTAP5-4Q6L8H1 288 aa8.79□□□□□ -1
CDK9-202ENST00000421939 ROMO1P60602 79 aa8.75□□□□□ -1.01
CDK9-202ENST00000421939 KRTAP19-4Q3LI73 84 aa8.7□□□□□ -1.02
CDK9-202ENST00000421939 GPR98Q8WXG9 6306 aa8.7□□□□□ -1.02
CDK9-202ENST00000421939 KRTAP15-1Q3LI76 137 aa8.68□□□□□ -1.02
CDK9-202ENST00000421939 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
CDK9-202ENST00000421939 KRTAP5-5Q701N2 237 aaPredicted RBP8.55□□□□□ -1.04
CDK9-202ENST00000421939 LCE3CQ5T5A8 94 aa8.5□□□□□ -1.05
CDK9-202ENST00000421939 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
CDK9-202ENST00000421939 AHNAK2Q8IVF2 5795 aa8.43□□□□□ -1.06
CDK9-202ENST00000421939 BRK1Q8WUW1 75 aa8.31□□□□□ -1.08
CDK9-202ENST00000421939 KRTAP20-2Q3LI61 65 aa8.29□□□□□ -1.08
CDK9-202ENST00000421939 KRTAP12-4P60329 112 aa8.28□□□□□ -1.08
CDK9-202ENST00000421939 SPRR5A0A1B0GTR4 108 aa8.27□□□□□ -1.09
CDK9-202ENST00000421939 SYNE1Q8NF91 8797 aaKnown RBP8.15□□□□□ -1.1
CDK9-202ENST00000421939 KRTAP5-10Q6L8G5 202 aa8.15□□□□□ -1.1
CDK9-202ENST00000421939 PRO0628Q9UI54 55 aa8.12□□□□□ -1.11
CDK9-202ENST00000421939 KRTAP5-3Q6L8H2 238 aa8.03□□□□□ -1.12
CDK9-202ENST00000421939 KRTAP9-6A8MVA2 160 aa8.02□□□□□ -1.13
CDK9-202ENST00000421939 MT1AP04731 61 aa8.02□□□□□ -1.13
CDK9-202ENST00000421939 KRTAP6-1Q3LI64 71 aa7.96□□□□□ -1.14
CDK9-202ENST00000421939 PMAIP1Q13794 54 aa7.9□□□□□ -1.14
CDK9-202ENST00000421939 KRTAP5-7Q6L8G8 165 aa7.81□□□□□ -1.16
CDK9-202ENST00000421939 KRTAP5-2Q701N4 177 aa7.75□□□□□ -1.17
CDK9-202ENST00000421939 KRTAP9-4Q9BYQ2 154 aa7.71□□□□□ -1.18
CDK9-202ENST00000421939 KRTAP6-2Q3LI66 62 aa7.57□□□□□ -1.2
CDK9-202ENST00000421939 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
CDK9-202ENST00000421939 KRTAP4-11Q9BYQ6 195 aa7.52□□□□□ -1.21
CDK9-202ENST00000421939 PRAC1Q96KF2 57 aa7.33□□□□□ -1.24
CDK9-202ENST00000421939 MT3P25713 68 aa7.32□□□□□ -1.24
CDK9-202ENST00000421939 KRTAP5-8O75690 187 aa7.26□□□□□ -1.25
CDK9-202ENST00000421939 SVIPQ8NHG7 77 aa7.23□□□□□ -1.25
CDK9-202ENST00000421939 OBSCNQ5VST9 7968 aa7.14□□□□□ -1.27
CDK9-202ENST00000421939 MUC5BQ9HC84 5762 aaPredicted RBP6.93□□□□□ -1.3
CDK9-202ENST00000421939 KRTAP5-1Q6L8H4 278 aa6.9□□□□□ -1.3
CDK9-202ENST00000421939 AHNAKQ09666 5890 aaKnown RBP6.89□□□□□ -1.31
CDK9-202ENST00000421939 MUC5ACP98088 5654 aa6.86□□□□□ -1.31
CDK9-202ENST00000421939 KRTAP9-9Q9BYP9 154 aa6.85□□□□□ -1.31
CDK9-202ENST00000421939 LCE1EQ5T753 118 aa6.68□□□□□ -1.34
CDK9-202ENST00000421939 KRTAP4-2Q9BYR5 136 aa6.3□□□□□ -1.4
CDK9-202ENST00000421939 LCE1BQ5T7P3 118 aa6.28□□□□□ -1.4
CDK9-202ENST00000421939 LCE1CQ5T751 118 aa6.2□□□□□ -1.42
CDK9-202ENST00000421939 LCE3DQ9BYE3 92 aa6.16□□□□□ -1.42
CDK9-202ENST00000421939 LUZP6Q538Z0 58 aa6.12□□□□□ -1.43
CDK9-202ENST00000421939 LCE3EQ5T5B0 92 aa5.83□□□□□ -1.48
CDK9-202ENST00000421939 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
CDK9-202ENST00000421939 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.67□□□□□ -1.5
CDK9-202ENST00000421939 KRTAP4-12Q9BQ66 201 aa5.62□□□□□ -1.51
CDK9-202ENST00000421939 KRTAP5-11Q6L8G4 156 aa5.61□□□□□ -1.51
CDK9-202ENST00000421939 LCE1FQ5T754 118 aa5.4□□□□□ -1.54
CDK9-202ENST00000421939 KRTAP21-2Q3LI59 83 aa5.23□□□□□ -1.57
CDK9-202ENST00000421939 A0A0A0MQY5 61 aa5.17□□□□□ -1.58
CDK9-202ENST00000421939 H3BS24 57 aa4.93□□□□□ -1.62
CDK9-202ENST00000421939 INE1O15225 51 aa4.88□□□□□ -1.63
CDK9-202ENST00000421939 PHGR1C9JFL3 82 aa4.83□□□□□ -1.64
CDK9-202ENST00000421939 KRTAP4-4Q9BYR3 166 aa4.76□□□□□ -1.65
CDK9-202ENST00000421939 PRM1P04553 51 aa4.49□□□□□ -1.69
CDK9-202ENST00000421939 MUC19Q7Z5P9 8384 aa4.38□□□□□ -1.71
CDK9-202ENST00000421939 KRTAP21-1Q3LI58 79 aa3.6□□□□□ -1.83
CDK9-202ENST00000421939 MUC16Q8WXI7 14507 aa3.14□□□□□ -1.91
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms