RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 MT1GP13640 62 aa7.69□□□□□ -1.18
FNDC3B-204ENST00000421757 PP632Q6XCG6 107 aa7.66□□□□□ -1.18
FNDC3B-204ENST00000421757 MT1LQ93083 61 aa7.63□□□□□ -1.19
FNDC3B-204ENST00000421757 DSTQ03001 7570 aaKnown RBP7.62□□□□□ -1.19
FNDC3B-204ENST00000421757 PCP4P48539 62 aa7.58□□□□□ -1.2
FNDC3B-204ENST00000421757 A6NED7 52 aa7.57□□□□□ -1.2
FNDC3B-204ENST00000421757 MT1MQ8N339 61 aa7.56□□□□□ -1.2
FNDC3B-204ENST00000421757 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
FNDC3B-204ENST00000421757 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
FNDC3B-204ENST00000421757 RPS28P62857 69 aaKnown RBP7.49□□□□□ -1.21
FNDC3B-204ENST00000421757 KRTAP4-3Q9BYR4 195 aa7.39□□□□□ -1.23
FNDC3B-204ENST00000421757 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
FNDC3B-204ENST00000421757 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
FNDC3B-204ENST00000421757 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
FNDC3B-204ENST00000421757 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
FNDC3B-204ENST00000421757 GPR98Q8WXG9 6306 aa7.23□□□□□ -1.25
FNDC3B-204ENST00000421757 LCE4AQ5TA78 99 aa7.21□□□□□ -1.26
FNDC3B-204ENST00000421757 ROMO1P60602 79 aa7.18□□□□□ -1.26
FNDC3B-204ENST00000421757 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
FNDC3B-204ENST00000421757 MT4P47944 62 aa7.15□□□□□ -1.26
FNDC3B-204ENST00000421757 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
FNDC3B-204ENST00000421757 KRTAP5-4Q6L8H1 288 aa7.07□□□□□ -1.28
FNDC3B-204ENST00000421757 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
FNDC3B-204ENST00000421757 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
FNDC3B-204ENST00000421757 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
FNDC3B-204ENST00000421757 LCE3CQ5T5A8 94 aa6.93□□□□□ -1.3
FNDC3B-204ENST00000421757 KRTAP5-5Q701N2 237 aaPredicted RBP6.89□□□□□ -1.31
FNDC3B-204ENST00000421757 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
FNDC3B-204ENST00000421757 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
FNDC3B-204ENST00000421757 KRTAP12-4P60329 112 aa6.73□□□□□ -1.33
FNDC3B-204ENST00000421757 KRTAP20-2Q3LI61 65 aa6.69□□□□□ -1.34
FNDC3B-204ENST00000421757 AHNAK2Q8IVF2 5795 aa6.67□□□□□ -1.34
FNDC3B-204ENST00000421757 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
FNDC3B-204ENST00000421757 BRK1Q8WUW1 75 aa6.67□□□□□ -1.34
FNDC3B-204ENST00000421757 KRTAP5-10Q6L8G5 202 aa6.66□□□□□ -1.34
FNDC3B-204ENST00000421757 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
FNDC3B-204ENST00000421757 KRTAP9-6A8MVA2 160 aa6.5□□□□□ -1.37
FNDC3B-204ENST00000421757 MT1AP04731 61 aa6.49□□□□□ -1.37
FNDC3B-204ENST00000421757 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
FNDC3B-204ENST00000421757 KRTAP6-1Q3LI64 71 aa6.45□□□□□ -1.38
FNDC3B-204ENST00000421757 KRTAP5-7Q6L8G8 165 aa6.44□□□□□ -1.38
FNDC3B-204ENST00000421757 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
FNDC3B-204ENST00000421757 PMAIP1Q13794 54 aa6.27□□□□□ -1.41
FNDC3B-204ENST00000421757 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
FNDC3B-204ENST00000421757 H3BS24 57 aa6.2□□□□□ -1.42
FNDC3B-204ENST00000421757 KRTAP6-2Q3LI66 62 aa6.14□□□□□ -1.43
FNDC3B-204ENST00000421757 KRTAP4-11Q9BYQ6 195 aa6.11□□□□□ -1.43
FNDC3B-204ENST00000421757 PRAC1Q96KF2 57 aa6□□□□□ -1.45
FNDC3B-204ENST00000421757 MT3P25713 68 aa5.96□□□□□ -1.46
FNDC3B-204ENST00000421757 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
FNDC3B-204ENST00000421757 KRTAP5-8O75690 187 aa5.85□□□□□ -1.47
FNDC3B-204ENST00000421757 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
FNDC3B-204ENST00000421757 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
FNDC3B-204ENST00000421757 KRTAP5-1Q6L8H4 278 aa5.56□□□□□ -1.52
FNDC3B-204ENST00000421757 MUC5BQ9HC84 5762 aaPredicted RBP5.53□□□□□ -1.52
FNDC3B-204ENST00000421757 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
FNDC3B-204ENST00000421757 AHNAKQ09666 5890 aaKnown RBP5.51□□□□□ -1.53
FNDC3B-204ENST00000421757 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
FNDC3B-204ENST00000421757 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
FNDC3B-204ENST00000421757 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
FNDC3B-204ENST00000421757 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
FNDC3B-204ENST00000421757 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
FNDC3B-204ENST00000421757 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
FNDC3B-204ENST00000421757 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
FNDC3B-204ENST00000421757 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.55□□□□□ -1.68
FNDC3B-204ENST00000421757 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
FNDC3B-204ENST00000421757 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
FNDC3B-204ENST00000421757 KRTAP21-2Q3LI59 83 aa4.22□□□□□ -1.73
FNDC3B-204ENST00000421757 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
FNDC3B-204ENST00000421757 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
FNDC3B-204ENST00000421757 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
FNDC3B-204ENST00000421757 PRM1P04553 51 aa3.69□□□□□ -1.82
FNDC3B-204ENST00000421757 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
FNDC3B-204ENST00000421757 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
FNDC3B-204ENST00000421757 INE1O15225 51 aa3.35□□□□□ -1.87
FNDC3B-204ENST00000421757 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
FNDC3B-204ENST00000421757 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms