RNA–Protein interactions for RNA: ENST00000421704.5

LINC00472-202, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-202ENST00000421704 KRTAP19-3Q7Z4W3 81 aa5.36□□□□□ -1.55
LINC00472-202ENST00000421704 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
LINC00472-202ENST00000421704 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.55
LINC00472-202ENST00000421704 KRTAP6-3Q3LI67 103 aa5.31□□□□□ -1.56
LINC00472-202ENST00000421704 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
LINC00472-202ENST00000421704 MT1MQ8N339 61 aa5.2□□□□□ -1.58
LINC00472-202ENST00000421704 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
LINC00472-202ENST00000421704 SPRR2EP22531 72 aa5.14□□□□□ -1.59
LINC00472-202ENST00000421704 SPRR2BP35325 72 aa5.14□□□□□ -1.59
LINC00472-202ENST00000421704 SPRR2AP35326 72 aa5.14□□□□□ -1.59
LINC00472-202ENST00000421704 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
LINC00472-202ENST00000421704 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
LINC00472-202ENST00000421704 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
LINC00472-202ENST00000421704 MUC12Q9UKN1 5478 aa5.05□□□□□ -1.6
LINC00472-202ENST00000421704 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
LINC00472-202ENST00000421704 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
LINC00472-202ENST00000421704 SPRR2DP22532 72 aa4.97□□□□□ -1.61
LINC00472-202ENST00000421704 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
LINC00472-202ENST00000421704 LOC100996750A0A140TA64 210 aa4.91□□□□□ -1.62
LINC00472-202ENST00000421704 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
LINC00472-202ENST00000421704 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
LINC00472-202ENST00000421704 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
LINC00472-202ENST00000421704 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
LINC00472-202ENST00000421704 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
LINC00472-202ENST00000421704 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
LINC00472-202ENST00000421704 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
LINC00472-202ENST00000421704 NEBP20929 6669 aa4.69□□□□□ -1.66
LINC00472-202ENST00000421704 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
LINC00472-202ENST00000421704 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
LINC00472-202ENST00000421704 MT1AP04731 61 aa4.65□□□□□ -1.67
LINC00472-202ENST00000421704 H3BS24 57 aa4.6□□□□□ -1.67
LINC00472-202ENST00000421704 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
LINC00472-202ENST00000421704 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
LINC00472-202ENST00000421704 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
LINC00472-202ENST00000421704 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
LINC00472-202ENST00000421704 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
LINC00472-202ENST00000421704 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
LINC00472-202ENST00000421704 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
LINC00472-202ENST00000421704 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
LINC00472-202ENST00000421704 INE1O15225 51 aa4.41□□□□□ -1.7
LINC00472-202ENST00000421704 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
LINC00472-202ENST00000421704 MT3P25713 68 aa4.26□□□□□ -1.73
LINC00472-202ENST00000421704 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
LINC00472-202ENST00000421704 MT4P47944 62 aa4.23□□□□□ -1.73
LINC00472-202ENST00000421704 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
LINC00472-202ENST00000421704 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
LINC00472-202ENST00000421704 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
LINC00472-202ENST00000421704 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
LINC00472-202ENST00000421704 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
LINC00472-202ENST00000421704 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
LINC00472-202ENST00000421704 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
LINC00472-202ENST00000421704 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
LINC00472-202ENST00000421704 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
LINC00472-202ENST00000421704 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
LINC00472-202ENST00000421704 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
LINC00472-202ENST00000421704 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
LINC00472-202ENST00000421704 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
LINC00472-202ENST00000421704 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
LINC00472-202ENST00000421704 KRTAP5-8O75690 187 aa3.47□□□□□ -1.85
LINC00472-202ENST00000421704 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
LINC00472-202ENST00000421704 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
LINC00472-202ENST00000421704 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
LINC00472-202ENST00000421704 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
LINC00472-202ENST00000421704 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
LINC00472-202ENST00000421704 PRM1P04553 51 aa3.41□□□□□ -1.86
LINC00472-202ENST00000421704 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.88
LINC00472-202ENST00000421704 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
LINC00472-202ENST00000421704 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
LINC00472-202ENST00000421704 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
LINC00472-202ENST00000421704 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
LINC00472-202ENST00000421704 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
LINC00472-202ENST00000421704 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
LINC00472-202ENST00000421704 PHGR1C9JFL3 82 aa2.58□□□□□ -2
LINC00472-202ENST00000421704 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
LINC00472-202ENST00000421704 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
LINC00472-202ENST00000421704 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
LINC00472-202ENST00000421704 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
LINC00472-202ENST00000421704 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 55.7 ms