RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 DSTQ03001 7570 aaKnown RBP5.51□□□□□ -1.53
PKP4-204ENST00000421462 MT1EP04732 61 aa5.49□□□□□ -1.53
PKP4-204ENST00000421462 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
PKP4-204ENST00000421462 MT1GP13640 62 aa5.44□□□□□ -1.54
PKP4-204ENST00000421462 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
PKP4-204ENST00000421462 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.55
PKP4-204ENST00000421462 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
PKP4-204ENST00000421462 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
PKP4-204ENST00000421462 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
PKP4-204ENST00000421462 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
PKP4-204ENST00000421462 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
PKP4-204ENST00000421462 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
PKP4-204ENST00000421462 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
PKP4-204ENST00000421462 MT1MQ8N339 61 aa5.13□□□□□ -1.59
PKP4-204ENST00000421462 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
PKP4-204ENST00000421462 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
PKP4-204ENST00000421462 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
PKP4-204ENST00000421462 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
PKP4-204ENST00000421462 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
PKP4-204ENST00000421462 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.62
PKP4-204ENST00000421462 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
PKP4-204ENST00000421462 PRM1P04553 51 aa4.86□□□□□ -1.63
PKP4-204ENST00000421462 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
PKP4-204ENST00000421462 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
PKP4-204ENST00000421462 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
PKP4-204ENST00000421462 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
PKP4-204ENST00000421462 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.65
PKP4-204ENST00000421462 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
PKP4-204ENST00000421462 MT1AP04731 61 aa4.69□□□□□ -1.66
PKP4-204ENST00000421462 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
PKP4-204ENST00000421462 SPRR2EP22531 72 aa4.44□□□□□ -1.7
PKP4-204ENST00000421462 SPRR2BP35325 72 aa4.44□□□□□ -1.7
PKP4-204ENST00000421462 SPRR2AP35326 72 aa4.44□□□□□ -1.7
PKP4-204ENST00000421462 LCE1AQ5T7P2 110 aa4.4□□□□□ -1.7
PKP4-204ENST00000421462 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
PKP4-204ENST00000421462 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
PKP4-204ENST00000421462 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.71
PKP4-204ENST00000421462 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.72
PKP4-204ENST00000421462 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
PKP4-204ENST00000421462 SPRR2DP22532 72 aa4.24□□□□□ -1.73
PKP4-204ENST00000421462 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
PKP4-204ENST00000421462 MT3P25713 68 aa4.15□□□□□ -1.75
PKP4-204ENST00000421462 NEBP20929 6669 aa4.01□□□□□ -1.77
PKP4-204ENST00000421462 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
PKP4-204ENST00000421462 MT4P47944 62 aa3.84□□□□□ -1.79
PKP4-204ENST00000421462 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
PKP4-204ENST00000421462 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
PKP4-204ENST00000421462 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
PKP4-204ENST00000421462 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
PKP4-204ENST00000421462 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
PKP4-204ENST00000421462 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.82
PKP4-204ENST00000421462 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
PKP4-204ENST00000421462 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
PKP4-204ENST00000421462 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
PKP4-204ENST00000421462 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
PKP4-204ENST00000421462 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
PKP4-204ENST00000421462 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
PKP4-204ENST00000421462 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
PKP4-204ENST00000421462 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
PKP4-204ENST00000421462 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
PKP4-204ENST00000421462 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
PKP4-204ENST00000421462 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
PKP4-204ENST00000421462 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PKP4-204ENST00000421462 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
PKP4-204ENST00000421462 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
PKP4-204ENST00000421462 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
PKP4-204ENST00000421462 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
PKP4-204ENST00000421462 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
PKP4-204ENST00000421462 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
PKP4-204ENST00000421462 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
PKP4-204ENST00000421462 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
PKP4-204ENST00000421462 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
PKP4-204ENST00000421462 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
PKP4-204ENST00000421462 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
PKP4-204ENST00000421462 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
PKP4-204ENST00000421462 PHGR1C9JFL3 82 aa2.21□□□□□ -2.05
PKP4-204ENST00000421462 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
PKP4-204ENST00000421462 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms