RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 A0A0D9SG42 100 aa3□□□□□ -1.93
AC012560.1-202ENST00000421324 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
AC012560.1-202ENST00000421324 A0A1B0GU69 56 aa2.99□□□□□ -1.93
AC012560.1-202ENST00000421324 SPRR2EP22531 72 aa2.99□□□□□ -1.93
AC012560.1-202ENST00000421324 SPRR2BP35325 72 aa2.99□□□□□ -1.93
AC012560.1-202ENST00000421324 SPRR2AP35326 72 aa2.99□□□□□ -1.93
AC012560.1-202ENST00000421324 SPATA8Q6RVD6 105 aa2.99□□□□□ -1.93
AC012560.1-202ENST00000421324 CCDC179H3BU77 68 aa2.98□□□□□ -1.93
AC012560.1-202ENST00000421324 SPINT4Q6UDR6 99 aa2.97□□□□□ -1.93
AC012560.1-202ENST00000421324 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
AC012560.1-202ENST00000421324 ATP5EP56381 51 aaPredicted RBP2.96□□□□□ -1.94
AC012560.1-202ENST00000421324 SMIM26A0A096LP01 95 aa2.95□□□□□ -1.94
AC012560.1-202ENST00000421324 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
AC012560.1-202ENST00000421324 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
AC012560.1-202ENST00000421324 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
AC012560.1-202ENST00000421324 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
AC012560.1-202ENST00000421324 KRTAP12-1P59990 96 aa2.91□□□□□ -1.94
AC012560.1-202ENST00000421324 SPRR2DP22532 72 aa2.89□□□□□ -1.95
AC012560.1-202ENST00000421324 TMEM258P61165 79 aa2.89□□□□□ -1.95
AC012560.1-202ENST00000421324 LINC01558Q9Y6Z2 57 aa2.88□□□□□ -1.95
AC012560.1-202ENST00000421324 KRTAP2-1Q9BYU5 128 aa2.85□□□□□ -1.95
AC012560.1-202ENST00000421324 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
AC012560.1-202ENST00000421324 UQCR11O14957 56 aa2.82□□□□□ -1.96
AC012560.1-202ENST00000421324 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
AC012560.1-202ENST00000421324 TNP1P09430 55 aa2.8□□□□□ -1.96
AC012560.1-202ENST00000421324 MT1EP04732 61 aa2.79□□□□□ -1.96
AC012560.1-202ENST00000421324 C10orf95Q9H7T3 257 aa2.78□□□□□ -1.96
AC012560.1-202ENST00000421324 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
AC012560.1-202ENST00000421324 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
AC012560.1-202ENST00000421324 V9GYY9 64 aa2.77□□□□□ -1.97
AC012560.1-202ENST00000421324 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
AC012560.1-202ENST00000421324 K7ERS5 55 aa2.73□□□□□ -1.97
AC012560.1-202ENST00000421324 MT1GP13640 62 aa2.73□□□□□ -1.97
AC012560.1-202ENST00000421324 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
AC012560.1-202ENST00000421324 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
AC012560.1-202ENST00000421324 PP632Q6XCG6 107 aa2.73□□□□□ -1.97
AC012560.1-202ENST00000421324 PSPHP1O15172 72 aa2.72□□□□□ -1.97
AC012560.1-202ENST00000421324 Q1T7F1 81 aa2.72□□□□□ -1.97
AC012560.1-202ENST00000421324 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
AC012560.1-202ENST00000421324 MT1LQ93083 61 aa2.68□□□□□ -1.98
AC012560.1-202ENST00000421324 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
AC012560.1-202ENST00000421324 MT1MQ8N339 61 aa2.66□□□□□ -1.98
AC012560.1-202ENST00000421324 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
AC012560.1-202ENST00000421324 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
AC012560.1-202ENST00000421324 A6NED7 52 aa2.64□□□□□ -1.99
AC012560.1-202ENST00000421324 RPS28P62857 69 aaKnown RBP2.63□□□□□ -1.99
AC012560.1-202ENST00000421324 CDC42SE1Q9NRR8 79 aa2.56□□□□□ -2
AC012560.1-202ENST00000421324 MT4P47944 62 aa2.52□□□□□ -2.01
AC012560.1-202ENST00000421324 ROMO1P60602 79 aa2.52□□□□□ -2.01
AC012560.1-202ENST00000421324 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
AC012560.1-202ENST00000421324 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
AC012560.1-202ENST00000421324 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
AC012560.1-202ENST00000421324 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
AC012560.1-202ENST00000421324 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
AC012560.1-202ENST00000421324 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
AC012560.1-202ENST00000421324 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
AC012560.1-202ENST00000421324 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
AC012560.1-202ENST00000421324 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
AC012560.1-202ENST00000421324 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
AC012560.1-202ENST00000421324 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
AC012560.1-202ENST00000421324 MT1AP04731 61 aa2.29□□□□□ -2.04
AC012560.1-202ENST00000421324 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
AC012560.1-202ENST00000421324 KRTAP6-1Q3LI64 71 aa2.26□□□□□ -2.05
AC012560.1-202ENST00000421324 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
AC012560.1-202ENST00000421324 KRTAP6-2Q3LI66 62 aa2.16□□□□□ -2.06
AC012560.1-202ENST00000421324 PRO0628Q9UI54 55 aa2.05□□□□□ -2.08
AC012560.1-202ENST00000421324 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
AC012560.1-202ENST00000421324 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
AC012560.1-202ENST00000421324 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
AC012560.1-202ENST00000421324 KTN1-AS1Q86SY8 53 aa1.93□□□□□ -2.1
AC012560.1-202ENST00000421324 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
AC012560.1-202ENST00000421324 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
AC012560.1-202ENST00000421324 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
AC012560.1-202ENST00000421324 PRM1P04553 51 aa1.27□□□□□ -2.21
AC012560.1-202ENST00000421324 INE1O15225 51 aa1.2□□□□□ -2.22
AC012560.1-202ENST00000421324 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
AC012560.1-202ENST00000421324 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 199.5 ms