RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 ANAPC13Q9BS18 74 aa6.53□□□□□ -1.36
VARS2-202ENST00000421263 AHNAK2Q8IVF2 5795 aa6.52□□□□□ -1.37
VARS2-202ENST00000421263 KRTAP4-6Q9BYQ5 205 aa6.47□□□□□ -1.37
VARS2-202ENST00000421263 PRR15LQ9BU68 103 aa6.43□□□□□ -1.38
VARS2-202ENST00000421263 KRTAP5-10Q6L8G5 202 aa6.42□□□□□ -1.38
VARS2-202ENST00000421263 CCDC179H3BU77 68 aa6.41□□□□□ -1.38
VARS2-202ENST00000421263 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
VARS2-202ENST00000421263 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
VARS2-202ENST00000421263 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
VARS2-202ENST00000421263 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
VARS2-202ENST00000421263 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
VARS2-202ENST00000421263 UQCR11O14957 56 aa6.22□□□□□ -1.41
VARS2-202ENST00000421263 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
VARS2-202ENST00000421263 KRTAP20-2Q3LI61 65 aa6.21□□□□□ -1.42
VARS2-202ENST00000421263 KRTAP5-7Q6L8G8 165 aa6.21□□□□□ -1.42
VARS2-202ENST00000421263 TMEM258P61165 79 aa6.18□□□□□ -1.42
VARS2-202ENST00000421263 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
VARS2-202ENST00000421263 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
VARS2-202ENST00000421263 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
VARS2-202ENST00000421263 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
VARS2-202ENST00000421263 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
VARS2-202ENST00000421263 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
VARS2-202ENST00000421263 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
VARS2-202ENST00000421263 K7ERS5 55 aa5.97□□□□□ -1.45
VARS2-202ENST00000421263 V9GYY9 64 aa5.9□□□□□ -1.46
VARS2-202ENST00000421263 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
VARS2-202ENST00000421263 PSPHP1O15172 72 aa5.86□□□□□ -1.47
VARS2-202ENST00000421263 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
VARS2-202ENST00000421263 Q1T7F1 81 aa5.84□□□□□ -1.47
VARS2-202ENST00000421263 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
VARS2-202ENST00000421263 KRTAP5-2Q701N4 177 aa5.74□□□□□ -1.49
VARS2-202ENST00000421263 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
VARS2-202ENST00000421263 MT1AP04731 61 aa5.71□□□□□ -1.5
VARS2-202ENST00000421263 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
VARS2-202ENST00000421263 A6NED7 52 aa5.66□□□□□ -1.5
VARS2-202ENST00000421263 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
VARS2-202ENST00000421263 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
VARS2-202ENST00000421263 KRTAP5-8O75690 187 aa5.55□□□□□ -1.52
VARS2-202ENST00000421263 ROMO1P60602 79 aa5.54□□□□□ -1.52
VARS2-202ENST00000421263 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
VARS2-202ENST00000421263 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
VARS2-202ENST00000421263 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
VARS2-202ENST00000421263 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
VARS2-202ENST00000421263 MUC5BQ9HC84 5762 aaPredicted RBP5.42□□□□□ -1.54
VARS2-202ENST00000421263 AHNAKQ09666 5890 aaKnown RBP5.41□□□□□ -1.54
VARS2-202ENST00000421263 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
VARS2-202ENST00000421263 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
VARS2-202ENST00000421263 MT3P25713 68 aa5.23□□□□□ -1.57
VARS2-202ENST00000421263 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
VARS2-202ENST00000421263 PCP4P48539 62 aa5.15□□□□□ -1.59
VARS2-202ENST00000421263 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
VARS2-202ENST00000421263 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
VARS2-202ENST00000421263 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
VARS2-202ENST00000421263 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
VARS2-202ENST00000421263 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
VARS2-202ENST00000421263 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
VARS2-202ENST00000421263 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
VARS2-202ENST00000421263 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
VARS2-202ENST00000421263 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
VARS2-202ENST00000421263 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
VARS2-202ENST00000421263 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
VARS2-202ENST00000421263 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
VARS2-202ENST00000421263 PRO0628Q9UI54 55 aa3.92□□□□□ -1.78
VARS2-202ENST00000421263 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
VARS2-202ENST00000421263 H3BS24 57 aa3.84□□□□□ -1.79
VARS2-202ENST00000421263 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
VARS2-202ENST00000421263 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
VARS2-202ENST00000421263 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
VARS2-202ENST00000421263 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
VARS2-202ENST00000421263 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
VARS2-202ENST00000421263 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
VARS2-202ENST00000421263 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
VARS2-202ENST00000421263 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
VARS2-202ENST00000421263 PRM1P04553 51 aa2.81□□□□□ -1.96
VARS2-202ENST00000421263 NDUFAF8A1L188 74 aa2.71□□□□□ -1.98
VARS2-202ENST00000421263 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
VARS2-202ENST00000421263 INE1O15225 51 aa2.17□□□□□ -2.06
VARS2-202ENST00000421263 A0A0A0MQY5 61 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 120.4 ms