RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
TRIM13-204ENST00000420995 MUC12Q9UKN1 5478 aa5.28□□□□□ -1.56
TRIM13-204ENST00000420995 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
TRIM13-204ENST00000420995 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
TRIM13-204ENST00000420995 MT1GP13640 62 aa5.15□□□□□ -1.59
TRIM13-204ENST00000420995 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
TRIM13-204ENST00000420995 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
TRIM13-204ENST00000420995 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
TRIM13-204ENST00000420995 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
TRIM13-204ENST00000420995 MT1MQ8N339 61 aa5.06□□□□□ -1.6
TRIM13-204ENST00000420995 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
TRIM13-204ENST00000420995 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
TRIM13-204ENST00000420995 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
TRIM13-204ENST00000420995 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
TRIM13-204ENST00000420995 MDN1Q9NU22 5596 aa4.88□□□□□ -1.63
TRIM13-204ENST00000420995 KRTAP9-6A0A140TA67 174 aa4.88□□□□□ -1.63
TRIM13-204ENST00000420995 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
TRIM13-204ENST00000420995 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
TRIM13-204ENST00000420995 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
TRIM13-204ENST00000420995 KRTAP4-9Q9BYQ8 210 aa4.77□□□□□ -1.65
TRIM13-204ENST00000420995 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
TRIM13-204ENST00000420995 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.66
TRIM13-204ENST00000420995 MT1AP04731 61 aa4.59□□□□□ -1.68
TRIM13-204ENST00000420995 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
TRIM13-204ENST00000420995 KRTAP5-9P26371 169 aa4.54□□□□□ -1.68
TRIM13-204ENST00000420995 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
TRIM13-204ENST00000420995 SPRR2EP22531 72 aa4.47□□□□□ -1.69
TRIM13-204ENST00000420995 SPRR2BP35325 72 aa4.47□□□□□ -1.69
TRIM13-204ENST00000420995 SPRR2AP35326 72 aa4.47□□□□□ -1.69
TRIM13-204ENST00000420995 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.69
TRIM13-204ENST00000420995 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.7
TRIM13-204ENST00000420995 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
TRIM13-204ENST00000420995 PRM1P04553 51 aa4.39□□□□□ -1.71
TRIM13-204ENST00000420995 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
TRIM13-204ENST00000420995 SPRR2DP22532 72 aa4.26□□□□□ -1.73
TRIM13-204ENST00000420995 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
TRIM13-204ENST00000420995 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
TRIM13-204ENST00000420995 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
TRIM13-204ENST00000420995 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
TRIM13-204ENST00000420995 MT3P25713 68 aa4.06□□□□□ -1.76
TRIM13-204ENST00000420995 NEBP20929 6669 aa4.06□□□□□ -1.76
TRIM13-204ENST00000420995 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
TRIM13-204ENST00000420995 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
TRIM13-204ENST00000420995 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
TRIM13-204ENST00000420995 MT4P47944 62 aa3.82□□□□□ -1.8
TRIM13-204ENST00000420995 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
TRIM13-204ENST00000420995 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
TRIM13-204ENST00000420995 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
TRIM13-204ENST00000420995 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
TRIM13-204ENST00000420995 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
TRIM13-204ENST00000420995 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
TRIM13-204ENST00000420995 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
TRIM13-204ENST00000420995 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
TRIM13-204ENST00000420995 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
TRIM13-204ENST00000420995 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
TRIM13-204ENST00000420995 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
TRIM13-204ENST00000420995 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
TRIM13-204ENST00000420995 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
TRIM13-204ENST00000420995 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
TRIM13-204ENST00000420995 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
TRIM13-204ENST00000420995 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
TRIM13-204ENST00000420995 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
TRIM13-204ENST00000420995 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
TRIM13-204ENST00000420995 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
TRIM13-204ENST00000420995 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
TRIM13-204ENST00000420995 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
TRIM13-204ENST00000420995 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
TRIM13-204ENST00000420995 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.94
TRIM13-204ENST00000420995 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
TRIM13-204ENST00000420995 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
TRIM13-204ENST00000420995 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
TRIM13-204ENST00000420995 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
TRIM13-204ENST00000420995 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
TRIM13-204ENST00000420995 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
TRIM13-204ENST00000420995 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
TRIM13-204ENST00000420995 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
TRIM13-204ENST00000420995 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 202.8 ms