RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
TMEM50B-201ENST00000420455 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
TMEM50B-201ENST00000420455 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
TMEM50B-201ENST00000420455 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
TMEM50B-201ENST00000420455 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
TMEM50B-201ENST00000420455 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
TMEM50B-201ENST00000420455 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
TMEM50B-201ENST00000420455 MT1GP13640 62 aa4.61□□□□□ -1.67
TMEM50B-201ENST00000420455 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
TMEM50B-201ENST00000420455 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
TMEM50B-201ENST00000420455 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
TMEM50B-201ENST00000420455 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
TMEM50B-201ENST00000420455 MT1MQ8N339 61 aa4.56□□□□□ -1.68
TMEM50B-201ENST00000420455 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
TMEM50B-201ENST00000420455 MDN1Q9NU22 5596 aa4.47□□□□□ -1.69
TMEM50B-201ENST00000420455 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
TMEM50B-201ENST00000420455 SPRR2EP22531 72 aa4.4□□□□□ -1.71
TMEM50B-201ENST00000420455 SPRR2BP35325 72 aa4.4□□□□□ -1.71
TMEM50B-201ENST00000420455 SPRR2AP35326 72 aa4.4□□□□□ -1.71
TMEM50B-201ENST00000420455 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
TMEM50B-201ENST00000420455 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
TMEM50B-201ENST00000420455 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
TMEM50B-201ENST00000420455 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
TMEM50B-201ENST00000420455 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
TMEM50B-201ENST00000420455 KRTAP2-1Q9BYU5 128 aa4.28□□□□□ -1.72
TMEM50B-201ENST00000420455 NEBP20929 6669 aa4.27□□□□□ -1.73
TMEM50B-201ENST00000420455 SPRR2DP22532 72 aa4.24□□□□□ -1.73
TMEM50B-201ENST00000420455 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
TMEM50B-201ENST00000420455 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
TMEM50B-201ENST00000420455 MT1AP04731 61 aa4.06□□□□□ -1.76
TMEM50B-201ENST00000420455 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
TMEM50B-201ENST00000420455 INE1O15225 51 aa4□□□□□ -1.77
TMEM50B-201ENST00000420455 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
TMEM50B-201ENST00000420455 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
TMEM50B-201ENST00000420455 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
TMEM50B-201ENST00000420455 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
TMEM50B-201ENST00000420455 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
TMEM50B-201ENST00000420455 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
TMEM50B-201ENST00000420455 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
TMEM50B-201ENST00000420455 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
TMEM50B-201ENST00000420455 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
TMEM50B-201ENST00000420455 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
TMEM50B-201ENST00000420455 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.82
TMEM50B-201ENST00000420455 MT3P25713 68 aa3.64□□□□□ -1.83
TMEM50B-201ENST00000420455 MT4P47944 62 aa3.64□□□□□ -1.83
TMEM50B-201ENST00000420455 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
TMEM50B-201ENST00000420455 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
TMEM50B-201ENST00000420455 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
TMEM50B-201ENST00000420455 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
TMEM50B-201ENST00000420455 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
TMEM50B-201ENST00000420455 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
TMEM50B-201ENST00000420455 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
TMEM50B-201ENST00000420455 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
TMEM50B-201ENST00000420455 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
TMEM50B-201ENST00000420455 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
TMEM50B-201ENST00000420455 PRM1P04553 51 aa3.18□□□□□ -1.9
TMEM50B-201ENST00000420455 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
TMEM50B-201ENST00000420455 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
TMEM50B-201ENST00000420455 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
TMEM50B-201ENST00000420455 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
TMEM50B-201ENST00000420455 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
TMEM50B-201ENST00000420455 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
TMEM50B-201ENST00000420455 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
TMEM50B-201ENST00000420455 LCE1CQ5T751 118 aa3□□□□□ -1.93
TMEM50B-201ENST00000420455 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
TMEM50B-201ENST00000420455 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
TMEM50B-201ENST00000420455 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
TMEM50B-201ENST00000420455 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
TMEM50B-201ENST00000420455 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
TMEM50B-201ENST00000420455 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
TMEM50B-201ENST00000420455 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
TMEM50B-201ENST00000420455 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
TMEM50B-201ENST00000420455 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
TMEM50B-201ENST00000420455 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
TMEM50B-201ENST00000420455 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
TMEM50B-201ENST00000420455 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
TMEM50B-201ENST00000420455 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
TMEM50B-201ENST00000420455 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 112.1 ms