RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
CHD2-202ENST00000420239 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CHD2-202ENST00000420239 KRTAP8-1Q8IUC2 63 aa2.45□□□□□ -2.02
CHD2-202ENST00000420239 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
CHD2-202ENST00000420239 LCE3EQ5T5B0 92 aa2.42□□□□□ -2.02
CHD2-202ENST00000420239 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
CHD2-202ENST00000420239 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
CHD2-202ENST00000420239 KRTAP12-3P60328 96 aa2.34□□□□□ -2.04
CHD2-202ENST00000420239 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
CHD2-202ENST00000420239 MUC2Q02817 5179 aa2.31□□□□□ -2.04
CHD2-202ENST00000420239 MT1XP80297 61 aa2.3□□□□□ -2.04
CHD2-202ENST00000420239 MT2AP02795 61 aa2.3□□□□□ -2.04
CHD2-202ENST00000420239 MT1FP04733 61 aa2.29□□□□□ -2.04
CHD2-202ENST00000420239 MT1BP07438 61 aa2.29□□□□□ -2.04
CHD2-202ENST00000420239 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
CHD2-202ENST00000420239 MT1HP80294 61 aa2.27□□□□□ -2.05
CHD2-202ENST00000420239 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
CHD2-202ENST00000420239 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
CHD2-202ENST00000420239 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
CHD2-202ENST00000420239 M0R2T5 61 aa2.22□□□□□ -2.05
CHD2-202ENST00000420239 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
CHD2-202ENST00000420239 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
CHD2-202ENST00000420239 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
CHD2-202ENST00000420239 FAT4Q6V0I7 4981 aa2.19□□□□□ -2.06
CHD2-202ENST00000420239 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
CHD2-202ENST00000420239 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
CHD2-202ENST00000420239 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
CHD2-202ENST00000420239 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
CHD2-202ENST00000420239 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
CHD2-202ENST00000420239 CRCT1Q9UGL9 99 aa2.08□□□□□ -2.08
CHD2-202ENST00000420239 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
CHD2-202ENST00000420239 FSIP2Q5CZC0 6907 aa2.06□□□□□ -2.08
CHD2-202ENST00000420239 MT1LQ93083 61 aa2.02□□□□□ -2.09
CHD2-202ENST00000420239 KMT2DO14686 5537 aa2□□□□□ -2.09
CHD2-202ENST00000420239 MT1EP04732 61 aa1.99□□□□□ -2.09
CHD2-202ENST00000420239 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
CHD2-202ENST00000420239 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
CHD2-202ENST00000420239 USH2AO75445 5202 aa1.89□□□□□ -2.11
CHD2-202ENST00000420239 MT1GP13640 62 aa1.89□□□□□ -2.11
CHD2-202ENST00000420239 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
CHD2-202ENST00000420239 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
CHD2-202ENST00000420239 SSPOA2VEC9 5147 aa1.85□□□□□ -2.11
CHD2-202ENST00000420239 MT1MQ8N339 61 aa1.85□□□□□ -2.11
CHD2-202ENST00000420239 SYNE2Q8WXH0 6885 aaKnown RBP1.84□□□□□ -2.12
CHD2-202ENST00000420239 MT1AP04731 61 aa1.83□□□□□ -2.12
CHD2-202ENST00000420239 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
CHD2-202ENST00000420239 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
CHD2-202ENST00000420239 MACF1Q9UPN3 7388 aaKnown RBP1.82□□□□□ -2.12
CHD2-202ENST00000420239 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
CHD2-202ENST00000420239 PRM1P04553 51 aa1.81□□□□□ -2.12
CHD2-202ENST00000420239 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
CHD2-202ENST00000420239 NEBP20929 6669 aa1.79□□□□□ -2.12
CHD2-202ENST00000420239 KRTAP20-1Q3LI63 56 aa1.73□□□□□ -2.13
CHD2-202ENST00000420239 KRTAP6-1Q3LI64 71 aa1.71□□□□□ -2.14
CHD2-202ENST00000420239 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
CHD2-202ENST00000420239 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
CHD2-202ENST00000420239 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
CHD2-202ENST00000420239 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
CHD2-202ENST00000420239 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
CHD2-202ENST00000420239 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
CHD2-202ENST00000420239 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
CHD2-202ENST00000420239 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
CHD2-202ENST00000420239 DSTQ03001 7570 aaKnown RBP1.54□□□□□ -2.16
CHD2-202ENST00000420239 SPRR2AP35326 72 aa1.52□□□□□ -2.17
CHD2-202ENST00000420239 SPRR2EP22531 72 aa1.49□□□□□ -2.17
CHD2-202ENST00000420239 SPRR2BP35325 72 aa1.49□□□□□ -2.17
CHD2-202ENST00000420239 SPRR2DP22532 72 aa1.44□□□□□ -2.18
CHD2-202ENST00000420239 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
CHD2-202ENST00000420239 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
CHD2-202ENST00000420239 KRTAP5-7Q6L8G8 165 aa1.36□□□□□ -2.19
CHD2-202ENST00000420239 MT4P47944 62 aa1.29□□□□□ -2.2
CHD2-202ENST00000420239 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
CHD2-202ENST00000420239 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
CHD2-202ENST00000420239 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
CHD2-202ENST00000420239 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
CHD2-202ENST00000420239 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
CHD2-202ENST00000420239 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms