RNA–Protein interactions for RNA: ENST00000420081.1

LINC00240-201, long intergenic non-protein coding RNA 240, humanhuman

TSL 5

Gene LINC00240, Length 339 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-201ENST00000420081 KRTAP12-2P59991 146 aa1.98□□□□□ -2.09
LINC00240-201ENST00000420081 KRTAP19-8Q3LI54 63 aa1.95□□□□□ -2.1
LINC00240-201ENST00000420081 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
LINC00240-201ENST00000420081 ROMO1P60602 79 aa1.94□□□□□ -2.1
LINC00240-201ENST00000420081 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
LINC00240-201ENST00000420081 MT1BP07438 61 aa1.92□□□□□ -2.1
LINC00240-201ENST00000420081 KTN1-AS1Q86SY8 53 aa1.91□□□□□ -2.1
LINC00240-201ENST00000420081 TNP1P09430 55 aa1.89□□□□□ -2.11
LINC00240-201ENST00000420081 KRTAP25-1Q3LHN0 102 aa1.88□□□□□ -2.11
LINC00240-201ENST00000420081 MT1XP80297 61 aa1.86□□□□□ -2.11
LINC00240-201ENST00000420081 LCE3CQ5T5A8 94 aa1.86□□□□□ -2.11
LINC00240-201ENST00000420081 C10orf95Q9H7T3 257 aa1.86□□□□□ -2.11
LINC00240-201ENST00000420081 USH2AO75445 5202 aa1.86□□□□□ -2.11
LINC00240-201ENST00000420081 NDUFAF8A1L188 74 aa1.85□□□□□ -2.11
LINC00240-201ENST00000420081 SSPOA2VEC9 5147 aa1.84□□□□□ -2.11
LINC00240-201ENST00000420081 PRAC1Q96KF2 57 aa1.84□□□□□ -2.11
LINC00240-201ENST00000420081 KRTAP19-6Q3LI70 58 aa1.83□□□□□ -2.12
LINC00240-201ENST00000420081 PP632Q6XCG6 107 aa1.82□□□□□ -2.12
LINC00240-201ENST00000420081 CRCT1Q9UGL9 99 aa1.8□□□□□ -2.12
LINC00240-201ENST00000420081 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
LINC00240-201ENST00000420081 KRTAP8-1Q8IUC2 63 aa1.74□□□□□ -2.13
LINC00240-201ENST00000420081 FCGBPQ9Y6R7 5405 aaPredicted RBP1.74□□□□□ -2.13
LINC00240-201ENST00000420081 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
LINC00240-201ENST00000420081 FSIP2Q5CZC0 6907 aa1.73□□□□□ -2.13
LINC00240-201ENST00000420081 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
LINC00240-201ENST00000420081 KRTAP19-5Q3LI72 72 aa1.7□□□□□ -2.14
LINC00240-201ENST00000420081 LCE3EQ5T5B0 92 aa1.69□□□□□ -2.14
LINC00240-201ENST00000420081 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
LINC00240-201ENST00000420081 MT1EP04732 61 aa1.65□□□□□ -2.15
LINC00240-201ENST00000420081 KRTAP19-7Q3SYF9 63 aa1.64□□□□□ -2.15
LINC00240-201ENST00000420081 KMT2DO14686 5537 aa1.62□□□□□ -2.15
LINC00240-201ENST00000420081 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
LINC00240-201ENST00000420081 SPRR2EP22531 72 aa1.61□□□□□ -2.15
LINC00240-201ENST00000420081 SPRR2BP35325 72 aa1.61□□□□□ -2.15
LINC00240-201ENST00000420081 SPRR2AP35326 72 aa1.61□□□□□ -2.15
LINC00240-201ENST00000420081 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
LINC00240-201ENST00000420081 MT1LQ93083 61 aa1.61□□□□□ -2.15
LINC00240-201ENST00000420081 KRTAP19-3Q7Z4W3 81 aa1.6□□□□□ -2.15
LINC00240-201ENST00000420081 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
LINC00240-201ENST00000420081 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
LINC00240-201ENST00000420081 MT1GP13640 62 aa1.57□□□□□ -2.16
LINC00240-201ENST00000420081 SPRR2DP22532 72 aa1.56□□□□□ -2.16
LINC00240-201ENST00000420081 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
LINC00240-201ENST00000420081 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
LINC00240-201ENST00000420081 MT1MQ8N339 61 aa1.56□□□□□ -2.16
LINC00240-201ENST00000420081 SYNE2Q8WXH0 6885 aaKnown RBP1.55□□□□□ -2.16
LINC00240-201ENST00000420081 MUC12Q9UKN1 5478 aa1.54□□□□□ -2.16
LINC00240-201ENST00000420081 SPRR5A0A1B0GTR4 108 aa1.52□□□□□ -2.17
LINC00240-201ENST00000420081 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
LINC00240-201ENST00000420081 NEBP20929 6669 aa1.48□□□□□ -2.17
LINC00240-201ENST00000420081 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
LINC00240-201ENST00000420081 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
LINC00240-201ENST00000420081 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
LINC00240-201ENST00000420081 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
LINC00240-201ENST00000420081 MT1AP04731 61 aa1.38□□□□□ -2.19
LINC00240-201ENST00000420081 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
LINC00240-201ENST00000420081 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
LINC00240-201ENST00000420081 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
LINC00240-201ENST00000420081 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
LINC00240-201ENST00000420081 MT4P47944 62 aa1.33□□□□□ -2.2
LINC00240-201ENST00000420081 LCE3DQ9BYE3 92 aa1.3□□□□□ -2.2
LINC00240-201ENST00000420081 SYNE1Q8NF91 8797 aaKnown RBP1.27□□□□□ -2.21
LINC00240-201ENST00000420081 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
LINC00240-201ENST00000420081 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
LINC00240-201ENST00000420081 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
LINC00240-201ENST00000420081 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
LINC00240-201ENST00000420081 INE1O15225 51 aa1.23□□□□□ -2.21
LINC00240-201ENST00000420081 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
LINC00240-201ENST00000420081 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
LINC00240-201ENST00000420081 GPR98Q8WXG9 6306 aa1.09□□□□□ -2.23
LINC00240-201ENST00000420081 KRTAP5-10Q6L8G5 202 aa1.07□□□□□ -2.24
LINC00240-201ENST00000420081 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
LINC00240-201ENST00000420081 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
LINC00240-201ENST00000420081 PRM1P04553 51 aa1□□□□□ -2.25
LINC00240-201ENST00000420081 AHNAKQ09666 5890 aaKnown RBP0.93□□□□□ -2.26
LINC00240-201ENST00000420081 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
LINC00240-201ENST00000420081 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
LINC00240-201ENST00000420081 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 58.6 ms