RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
SEC24D-202ENST00000419654 INE1O15225 51 aa5.26□□□□□ -1.57
SEC24D-202ENST00000419654 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
SEC24D-202ENST00000419654 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.57
SEC24D-202ENST00000419654 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
SEC24D-202ENST00000419654 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
SEC24D-202ENST00000419654 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.58
SEC24D-202ENST00000419654 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
SEC24D-202ENST00000419654 DSTQ03001 7570 aaKnown RBP5.11□□□□□ -1.59
SEC24D-202ENST00000419654 MT1GP13640 62 aa5.11□□□□□ -1.59
SEC24D-202ENST00000419654 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
SEC24D-202ENST00000419654 KRTAP5-9P26371 169 aa5.09□□□□□ -1.6
SEC24D-202ENST00000419654 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
SEC24D-202ENST00000419654 MT1MQ8N339 61 aa5.07□□□□□ -1.6
SEC24D-202ENST00000419654 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
SEC24D-202ENST00000419654 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
SEC24D-202ENST00000419654 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
SEC24D-202ENST00000419654 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
SEC24D-202ENST00000419654 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
SEC24D-202ENST00000419654 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
SEC24D-202ENST00000419654 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
SEC24D-202ENST00000419654 SPRR2EP22531 72 aa4.86□□□□□ -1.63
SEC24D-202ENST00000419654 SPRR2BP35325 72 aa4.86□□□□□ -1.63
SEC24D-202ENST00000419654 SPRR2AP35326 72 aa4.86□□□□□ -1.63
SEC24D-202ENST00000419654 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
SEC24D-202ENST00000419654 SPRR2DP22532 72 aa4.67□□□□□ -1.66
SEC24D-202ENST00000419654 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
SEC24D-202ENST00000419654 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
SEC24D-202ENST00000419654 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
SEC24D-202ENST00000419654 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
SEC24D-202ENST00000419654 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
SEC24D-202ENST00000419654 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
SEC24D-202ENST00000419654 NEBP20929 6669 aa4.57□□□□□ -1.68
SEC24D-202ENST00000419654 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
SEC24D-202ENST00000419654 MT1AP04731 61 aa4.5□□□□□ -1.69
SEC24D-202ENST00000419654 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
SEC24D-202ENST00000419654 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
SEC24D-202ENST00000419654 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
SEC24D-202ENST00000419654 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
SEC24D-202ENST00000419654 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
SEC24D-202ENST00000419654 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
SEC24D-202ENST00000419654 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
SEC24D-202ENST00000419654 PRM1P04553 51 aa4.1□□□□□ -1.75
SEC24D-202ENST00000419654 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
SEC24D-202ENST00000419654 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
SEC24D-202ENST00000419654 MT3P25713 68 aa4.06□□□□□ -1.76
SEC24D-202ENST00000419654 MT4P47944 62 aa4.06□□□□□ -1.76
SEC24D-202ENST00000419654 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
SEC24D-202ENST00000419654 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
SEC24D-202ENST00000419654 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
SEC24D-202ENST00000419654 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
SEC24D-202ENST00000419654 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
SEC24D-202ENST00000419654 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
SEC24D-202ENST00000419654 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
SEC24D-202ENST00000419654 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SEC24D-202ENST00000419654 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
SEC24D-202ENST00000419654 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
SEC24D-202ENST00000419654 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
SEC24D-202ENST00000419654 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
SEC24D-202ENST00000419654 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
SEC24D-202ENST00000419654 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
SEC24D-202ENST00000419654 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.89
SEC24D-202ENST00000419654 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
SEC24D-202ENST00000419654 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
SEC24D-202ENST00000419654 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SEC24D-202ENST00000419654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SEC24D-202ENST00000419654 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
SEC24D-202ENST00000419654 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
SEC24D-202ENST00000419654 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
SEC24D-202ENST00000419654 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SEC24D-202ENST00000419654 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
SEC24D-202ENST00000419654 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SEC24D-202ENST00000419654 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
SEC24D-202ENST00000419654 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
SEC24D-202ENST00000419654 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
SEC24D-202ENST00000419654 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
SEC24D-202ENST00000419654 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms