RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
HMGN1-205ENST00000419378 KRTAP13-4Q3LI77 160 aa2.78□□□□□ -1.96
HMGN1-205ENST00000419378 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
HMGN1-205ENST00000419378 H7BZZ5 65 aa2.77□□□□□ -1.97
HMGN1-205ENST00000419378 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
HMGN1-205ENST00000419378 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
HMGN1-205ENST00000419378 SPRR2EP22531 72 aa2.74□□□□□ -1.97
HMGN1-205ENST00000419378 SPRR2BP35325 72 aa2.74□□□□□ -1.97
HMGN1-205ENST00000419378 SPRR2AP35326 72 aa2.74□□□□□ -1.97
HMGN1-205ENST00000419378 TMEM258P61165 79 aa2.74□□□□□ -1.97
HMGN1-205ENST00000419378 SERP1Q9Y6X1 66 aa2.73□□□□□ -1.97
HMGN1-205ENST00000419378 CCDC179H3BU77 68 aa2.72□□□□□ -1.97
HMGN1-205ENST00000419378 A0A0D9SG42 100 aa2.69□□□□□ -1.98
HMGN1-205ENST00000419378 PSPHP1O15172 72 aa2.69□□□□□ -1.98
HMGN1-205ENST00000419378 ATP5EP56381 51 aaPredicted RBP2.69□□□□□ -1.98
HMGN1-205ENST00000419378 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
HMGN1-205ENST00000419378 A0A1B0GU33 70 aa2.68□□□□□ -1.98
HMGN1-205ENST00000419378 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
HMGN1-205ENST00000419378 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
HMGN1-205ENST00000419378 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
HMGN1-205ENST00000419378 A0A1B0GU69 56 aa2.66□□□□□ -1.98
HMGN1-205ENST00000419378 SPRR2DP22532 72 aa2.65□□□□□ -1.99
HMGN1-205ENST00000419378 SPINT4Q6UDR6 99 aa2.65□□□□□ -1.99
HMGN1-205ENST00000419378 KRTAP12-1P59990 96 aa2.64□□□□□ -1.99
HMGN1-205ENST00000419378 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
HMGN1-205ENST00000419378 PRO0628Q9UI54 55 aa2.63□□□□□ -1.99
HMGN1-205ENST00000419378 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
HMGN1-205ENST00000419378 V9GYY9 64 aa2.6□□□□□ -1.99
HMGN1-205ENST00000419378 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
HMGN1-205ENST00000419378 PRR15LQ9BU68 103 aa2.59□□□□□ -1.99
HMGN1-205ENST00000419378 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
HMGN1-205ENST00000419378 MT1EP04732 61 aa2.57□□□□□ -2
HMGN1-205ENST00000419378 LINC01558Q9Y6Z2 57 aa2.57□□□□□ -2
HMGN1-205ENST00000419378 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
HMGN1-205ENST00000419378 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2
HMGN1-205ENST00000419378 C10orf95Q9H7T3 257 aa2.53□□□□□ -2
HMGN1-205ENST00000419378 Q1T7F1 81 aa2.52□□□□□ -2.01
HMGN1-205ENST00000419378 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
HMGN1-205ENST00000419378 UQCR11O14957 56 aa2.5□□□□□ -2.01
HMGN1-205ENST00000419378 TNP1P09430 55 aa2.5□□□□□ -2.01
HMGN1-205ENST00000419378 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
HMGN1-205ENST00000419378 BRK1Q8WUW1 75 aa2.49□□□□□ -2.01
HMGN1-205ENST00000419378 MT1GP13640 62 aa2.47□□□□□ -2.01
HMGN1-205ENST00000419378 MT1LQ93083 61 aa2.46□□□□□ -2.02
HMGN1-205ENST00000419378 MIR22HGQ0VDD5 57 aa2.45□□□□□ -2.02
HMGN1-205ENST00000419378 MT1MQ8N339 61 aa2.44□□□□□ -2.02
HMGN1-205ENST00000419378 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
HMGN1-205ENST00000419378 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
HMGN1-205ENST00000419378 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
HMGN1-205ENST00000419378 K7ERS5 55 aa2.39□□□□□ -2.03
HMGN1-205ENST00000419378 KRTAP12-3P60328 96 aa2.39□□□□□ -2.03
HMGN1-205ENST00000419378 KRTAP25-1Q3LHN0 102 aa2.38□□□□□ -2.03
HMGN1-205ENST00000419378 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
HMGN1-205ENST00000419378 CDC42SE1Q9NRR8 79 aa2.37□□□□□ -2.03
HMGN1-205ENST00000419378 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
HMGN1-205ENST00000419378 A6NED7 52 aa2.36□□□□□ -2.03
HMGN1-205ENST00000419378 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
HMGN1-205ENST00000419378 MT4P47944 62 aa2.31□□□□□ -2.04
HMGN1-205ENST00000419378 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
HMGN1-205ENST00000419378 ROMO1P60602 79 aa2.24□□□□□ -2.05
HMGN1-205ENST00000419378 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
HMGN1-205ENST00000419378 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
HMGN1-205ENST00000419378 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
HMGN1-205ENST00000419378 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
HMGN1-205ENST00000419378 MT1AP04731 61 aa2.09□□□□□ -2.07
HMGN1-205ENST00000419378 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
HMGN1-205ENST00000419378 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
HMGN1-205ENST00000419378 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
HMGN1-205ENST00000419378 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
HMGN1-205ENST00000419378 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
HMGN1-205ENST00000419378 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
HMGN1-205ENST00000419378 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
HMGN1-205ENST00000419378 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
HMGN1-205ENST00000419378 INE1O15225 51 aa1.7□□□□□ -2.14
HMGN1-205ENST00000419378 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
HMGN1-205ENST00000419378 PRM1P04553 51 aa1.15□□□□□ -2.23
HMGN1-205ENST00000419378 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
HMGN1-205ENST00000419378 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 26.7 ms