RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
HLA-DPA1-242ENST00000419277 SSPOA2VEC9 5147 aa5.29□□□□□ -1.56
HLA-DPA1-242ENST00000419277 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
HLA-DPA1-242ENST00000419277 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
HLA-DPA1-242ENST00000419277 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
HLA-DPA1-242ENST00000419277 LCE4AQ5TA78 99 aa5.19□□□□□ -1.58
HLA-DPA1-242ENST00000419277 MT1EP04732 61 aa5.17□□□□□ -1.58
HLA-DPA1-242ENST00000419277 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.58
HLA-DPA1-242ENST00000419277 MT1LQ93083 61 aa5.12□□□□□ -1.59
HLA-DPA1-242ENST00000419277 KMT2DO14686 5537 aa5.09□□□□□ -1.59
HLA-DPA1-242ENST00000419277 INE1O15225 51 aa5.09□□□□□ -1.59
HLA-DPA1-242ENST00000419277 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
HLA-DPA1-242ENST00000419277 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
HLA-DPA1-242ENST00000419277 FCGBPQ9Y6R7 5405 aaPredicted RBP4.99□□□□□ -1.61
HLA-DPA1-242ENST00000419277 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
HLA-DPA1-242ENST00000419277 MT1GP13640 62 aa4.94□□□□□ -1.62
HLA-DPA1-242ENST00000419277 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
HLA-DPA1-242ENST00000419277 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
HLA-DPA1-242ENST00000419277 MT1MQ8N339 61 aa4.85□□□□□ -1.63
HLA-DPA1-242ENST00000419277 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
HLA-DPA1-242ENST00000419277 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
HLA-DPA1-242ENST00000419277 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
HLA-DPA1-242ENST00000419277 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
HLA-DPA1-242ENST00000419277 MACF1Q9UPN3 7388 aaKnown RBP4.78□□□□□ -1.64
HLA-DPA1-242ENST00000419277 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
HLA-DPA1-242ENST00000419277 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
HLA-DPA1-242ENST00000419277 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
HLA-DPA1-242ENST00000419277 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
HLA-DPA1-242ENST00000419277 MUC12Q9UKN1 5478 aa4.61□□□□□ -1.67
HLA-DPA1-242ENST00000419277 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
HLA-DPA1-242ENST00000419277 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
HLA-DPA1-242ENST00000419277 SPRR2EP22531 72 aa4.46□□□□□ -1.7
HLA-DPA1-242ENST00000419277 SPRR2BP35325 72 aa4.46□□□□□ -1.7
HLA-DPA1-242ENST00000419277 SPRR2AP35326 72 aa4.46□□□□□ -1.7
HLA-DPA1-242ENST00000419277 MT1AP04731 61 aa4.39□□□□□ -1.71
HLA-DPA1-242ENST00000419277 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
HLA-DPA1-242ENST00000419277 NEBP20929 6669 aa4.35□□□□□ -1.71
HLA-DPA1-242ENST00000419277 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
HLA-DPA1-242ENST00000419277 SPRR2DP22532 72 aa4.3□□□□□ -1.72
HLA-DPA1-242ENST00000419277 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
HLA-DPA1-242ENST00000419277 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
HLA-DPA1-242ENST00000419277 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
HLA-DPA1-242ENST00000419277 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
HLA-DPA1-242ENST00000419277 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
HLA-DPA1-242ENST00000419277 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
HLA-DPA1-242ENST00000419277 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
HLA-DPA1-242ENST00000419277 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
HLA-DPA1-242ENST00000419277 MT3P25713 68 aa3.98□□□□□ -1.77
HLA-DPA1-242ENST00000419277 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
HLA-DPA1-242ENST00000419277 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
HLA-DPA1-242ENST00000419277 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
HLA-DPA1-242ENST00000419277 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
HLA-DPA1-242ENST00000419277 MT4P47944 62 aa3.65□□□□□ -1.82
HLA-DPA1-242ENST00000419277 PRM1P04553 51 aa3.58□□□□□ -1.84
HLA-DPA1-242ENST00000419277 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
HLA-DPA1-242ENST00000419277 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
HLA-DPA1-242ENST00000419277 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
HLA-DPA1-242ENST00000419277 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
HLA-DPA1-242ENST00000419277 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
HLA-DPA1-242ENST00000419277 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
HLA-DPA1-242ENST00000419277 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
HLA-DPA1-242ENST00000419277 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
HLA-DPA1-242ENST00000419277 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
HLA-DPA1-242ENST00000419277 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
HLA-DPA1-242ENST00000419277 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
HLA-DPA1-242ENST00000419277 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
HLA-DPA1-242ENST00000419277 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
HLA-DPA1-242ENST00000419277 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
HLA-DPA1-242ENST00000419277 LCE1FQ5T754 118 aa2.96□□□□□ -1.93
HLA-DPA1-242ENST00000419277 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
HLA-DPA1-242ENST00000419277 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
HLA-DPA1-242ENST00000419277 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
HLA-DPA1-242ENST00000419277 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
HLA-DPA1-242ENST00000419277 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
HLA-DPA1-242ENST00000419277 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
HLA-DPA1-242ENST00000419277 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
HLA-DPA1-242ENST00000419277 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 47.9 ms