RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 UQCR11O14957 56 aa7.33□□□□□ -1.24
PKNOX1-202ENST00000418336 MT1MQ8N339 61 aa7.32□□□□□ -1.24
PKNOX1-202ENST00000418336 Q1T7F1 81 aa7.31□□□□□ -1.24
PKNOX1-202ENST00000418336 PSPHP1O15172 72 aa7.23□□□□□ -1.25
PKNOX1-202ENST00000418336 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
PKNOX1-202ENST00000418336 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
PKNOX1-202ENST00000418336 KRTAP4-9Q9BYQ8 210 aa7.18□□□□□ -1.26
PKNOX1-202ENST00000418336 KRTAP4-3Q9BYR4 195 aa7.18□□□□□ -1.26
PKNOX1-202ENST00000418336 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
PKNOX1-202ENST00000418336 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
PKNOX1-202ENST00000418336 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
PKNOX1-202ENST00000418336 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
PKNOX1-202ENST00000418336 A6NED7 52 aa7.04□□□□□ -1.28
PKNOX1-202ENST00000418336 HMCN1Q96RW7 5635 aa7.03□□□□□ -1.28
PKNOX1-202ENST00000418336 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
PKNOX1-202ENST00000418336 LCE1DQ5T752 114 aa7.01□□□□□ -1.29
PKNOX1-202ENST00000418336 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
PKNOX1-202ENST00000418336 KRTAP5-4Q6L8H1 288 aa6.99□□□□□ -1.29
PKNOX1-202ENST00000418336 MT4P47944 62 aa6.9□□□□□ -1.3
PKNOX1-202ENST00000418336 K7ERS5 55 aa6.89□□□□□ -1.31
PKNOX1-202ENST00000418336 AHNAK2Q8IVF2 5795 aa6.85□□□□□ -1.31
PKNOX1-202ENST00000418336 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
PKNOX1-202ENST00000418336 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
PKNOX1-202ENST00000418336 KRTAP5-5Q701N2 237 aaPredicted RBP6.79□□□□□ -1.32
PKNOX1-202ENST00000418336 BRK1Q8WUW1 75 aa6.71□□□□□ -1.34
PKNOX1-202ENST00000418336 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
PKNOX1-202ENST00000418336 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
PKNOX1-202ENST00000418336 ROMO1P60602 79 aa6.58□□□□□ -1.36
PKNOX1-202ENST00000418336 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
PKNOX1-202ENST00000418336 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
PKNOX1-202ENST00000418336 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
PKNOX1-202ENST00000418336 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.37
PKNOX1-202ENST00000418336 SPRR5A0A1B0GTR4 108 aa6.5□□□□□ -1.37
PKNOX1-202ENST00000418336 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
PKNOX1-202ENST00000418336 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
PKNOX1-202ENST00000418336 KRTAP5-7Q6L8G8 165 aa6.36□□□□□ -1.39
PKNOX1-202ENST00000418336 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
PKNOX1-202ENST00000418336 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
PKNOX1-202ENST00000418336 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
PKNOX1-202ENST00000418336 MT1AP04731 61 aa6.26□□□□□ -1.41
PKNOX1-202ENST00000418336 KRTAP6-1Q3LI64 71 aa6.24□□□□□ -1.41
PKNOX1-202ENST00000418336 KRTAP5-2Q701N4 177 aa6.15□□□□□ -1.42
PKNOX1-202ENST00000418336 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
PKNOX1-202ENST00000418336 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
PKNOX1-202ENST00000418336 KRTAP4-12Q9BQ66 201 aa5.97□□□□□ -1.45
PKNOX1-202ENST00000418336 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
PKNOX1-202ENST00000418336 KRTAP4-11Q9BYQ6 195 aa5.93□□□□□ -1.46
PKNOX1-202ENST00000418336 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
PKNOX1-202ENST00000418336 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
PKNOX1-202ENST00000418336 KRTAP5-8O75690 187 aa5.78□□□□□ -1.48
PKNOX1-202ENST00000418336 AHNAKQ09666 5890 aaKnown RBP5.7□□□□□ -1.5
PKNOX1-202ENST00000418336 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
PKNOX1-202ENST00000418336 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
PKNOX1-202ENST00000418336 MUC5BQ9HC84 5762 aaPredicted RBP5.67□□□□□ -1.5
PKNOX1-202ENST00000418336 MT3P25713 68 aa5.67□□□□□ -1.5
PKNOX1-202ENST00000418336 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
PKNOX1-202ENST00000418336 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
PKNOX1-202ENST00000418336 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
PKNOX1-202ENST00000418336 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
PKNOX1-202ENST00000418336 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
PKNOX1-202ENST00000418336 H3BS24 57 aa4.98□□□□□ -1.61
PKNOX1-202ENST00000418336 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
PKNOX1-202ENST00000418336 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
PKNOX1-202ENST00000418336 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
PKNOX1-202ENST00000418336 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
PKNOX1-202ENST00000418336 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
PKNOX1-202ENST00000418336 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
PKNOX1-202ENST00000418336 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
PKNOX1-202ENST00000418336 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
PKNOX1-202ENST00000418336 KRTAP21-2Q3LI59 83 aa4.15□□□□□ -1.75
PKNOX1-202ENST00000418336 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
PKNOX1-202ENST00000418336 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
PKNOX1-202ENST00000418336 INE1O15225 51 aa3.78□□□□□ -1.8
PKNOX1-202ENST00000418336 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
PKNOX1-202ENST00000418336 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
PKNOX1-202ENST00000418336 PRM1P04553 51 aa3.38□□□□□ -1.87
PKNOX1-202ENST00000418336 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
PKNOX1-202ENST00000418336 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms