RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
LINC00940-201ENST00000418006 KRTAP2-3P0C7H8 128 aa4.81□□□□□ -1.64
LINC00940-201ENST00000418006 KRTAP2-4Q9BYR9 128 aa4.81□□□□□ -1.64
LINC00940-201ENST00000418006 KRTAP2-1Q9BYU5 128 aa4.81□□□□□ -1.64
LINC00940-201ENST00000418006 MT1LQ93083 61 aa4.8□□□□□ -1.64
LINC00940-201ENST00000418006 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
LINC00940-201ENST00000418006 SPRR2FQ96RM1 72 aa4.75□□□□□ -1.65
LINC00940-201ENST00000418006 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
LINC00940-201ENST00000418006 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
LINC00940-201ENST00000418006 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
LINC00940-201ENST00000418006 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.67
LINC00940-201ENST00000418006 MT1GP13640 62 aa4.59□□□□□ -1.67
LINC00940-201ENST00000418006 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
LINC00940-201ENST00000418006 MT1MQ8N339 61 aa4.58□□□□□ -1.68
LINC00940-201ENST00000418006 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
LINC00940-201ENST00000418006 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
LINC00940-201ENST00000418006 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
LINC00940-201ENST00000418006 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
LINC00940-201ENST00000418006 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
LINC00940-201ENST00000418006 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
LINC00940-201ENST00000418006 SPRR2EP22531 72 aa4.44□□□□□ -1.7
LINC00940-201ENST00000418006 SPRR2BP35325 72 aa4.44□□□□□ -1.7
LINC00940-201ENST00000418006 SPRR2AP35326 72 aa4.44□□□□□ -1.7
LINC00940-201ENST00000418006 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
LINC00940-201ENST00000418006 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
LINC00940-201ENST00000418006 SPRR2DP22532 72 aa4.26□□□□□ -1.73
LINC00940-201ENST00000418006 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
LINC00940-201ENST00000418006 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
LINC00940-201ENST00000418006 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
LINC00940-201ENST00000418006 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
LINC00940-201ENST00000418006 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
LINC00940-201ENST00000418006 NEBP20929 6669 aa4.06□□□□□ -1.76
LINC00940-201ENST00000418006 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
LINC00940-201ENST00000418006 MT1AP04731 61 aa4.03□□□□□ -1.76
LINC00940-201ENST00000418006 PRM1P04553 51 aa3.9□□□□□ -1.78
LINC00940-201ENST00000418006 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.78
LINC00940-201ENST00000418006 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
LINC00940-201ENST00000418006 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
LINC00940-201ENST00000418006 MT4P47944 62 aa3.78□□□□□ -1.8
LINC00940-201ENST00000418006 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
LINC00940-201ENST00000418006 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
LINC00940-201ENST00000418006 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
LINC00940-201ENST00000418006 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
LINC00940-201ENST00000418006 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
LINC00940-201ENST00000418006 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
LINC00940-201ENST00000418006 MT3P25713 68 aa3.67□□□□□ -1.82
LINC00940-201ENST00000418006 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
LINC00940-201ENST00000418006 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
LINC00940-201ENST00000418006 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
LINC00940-201ENST00000418006 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.84
LINC00940-201ENST00000418006 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
LINC00940-201ENST00000418006 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
LINC00940-201ENST00000418006 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
LINC00940-201ENST00000418006 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.92
LINC00940-201ENST00000418006 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
LINC00940-201ENST00000418006 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
LINC00940-201ENST00000418006 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
LINC00940-201ENST00000418006 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
LINC00940-201ENST00000418006 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.94
LINC00940-201ENST00000418006 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
LINC00940-201ENST00000418006 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
LINC00940-201ENST00000418006 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.94
LINC00940-201ENST00000418006 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
LINC00940-201ENST00000418006 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
LINC00940-201ENST00000418006 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
LINC00940-201ENST00000418006 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
LINC00940-201ENST00000418006 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
LINC00940-201ENST00000418006 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
LINC00940-201ENST00000418006 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
LINC00940-201ENST00000418006 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
LINC00940-201ENST00000418006 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
LINC00940-201ENST00000418006 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
LINC00940-201ENST00000418006 LCE1FQ5T754 118 aa2.46□□□□□ -2.01
LINC00940-201ENST00000418006 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
LINC00940-201ENST00000418006 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
LINC00940-201ENST00000418006 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
LINC00940-201ENST00000418006 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 73.3 ms