RNA–Protein interactions for RNA: ENST00000417464.6

UPP1-205, Transcript of uridine phosphorylase 1, humanhuman

TSL 1 (best)

Gene UPP1, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP1-205ENST00000417464 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
UPP1-205ENST00000417464 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
UPP1-205ENST00000417464 PSPHP1O15172 72 aa6.78□□□□□ -1.32
UPP1-205ENST00000417464 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
UPP1-205ENST00000417464 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
UPP1-205ENST00000417464 Q1T7F1 81 aa6.66□□□□□ -1.34
UPP1-205ENST00000417464 V9GYY9 64 aa6.63□□□□□ -1.35
UPP1-205ENST00000417464 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
UPP1-205ENST00000417464 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
UPP1-205ENST00000417464 K7ERS5 55 aa6.57□□□□□ -1.36
UPP1-205ENST00000417464 MT4P47944 62 aa6.57□□□□□ -1.36
UPP1-205ENST00000417464 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
UPP1-205ENST00000417464 A6NED7 52 aa6.49□□□□□ -1.37
UPP1-205ENST00000417464 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
UPP1-205ENST00000417464 HMCN1Q96RW7 5635 aa6.47□□□□□ -1.37
UPP1-205ENST00000417464 KRTAP5-4Q6L8H1 288 aa6.45□□□□□ -1.38
UPP1-205ENST00000417464 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
UPP1-205ENST00000417464 PCP4P48539 62 aa6.36□□□□□ -1.39
UPP1-205ENST00000417464 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
UPP1-205ENST00000417464 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
UPP1-205ENST00000417464 CDC42SE1Q9NRR8 79 aa6.28□□□□□ -1.4
UPP1-205ENST00000417464 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
UPP1-205ENST00000417464 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
UPP1-205ENST00000417464 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
UPP1-205ENST00000417464 AHNAK2Q8IVF2 5795 aa6.22□□□□□ -1.41
UPP1-205ENST00000417464 ROMO1P60602 79 aa6.21□□□□□ -1.42
UPP1-205ENST00000417464 LCE3CQ5T5A8 94 aa6.16□□□□□ -1.42
UPP1-205ENST00000417464 KRTAP20-2Q3LI61 65 aa6.12□□□□□ -1.43
UPP1-205ENST00000417464 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
UPP1-205ENST00000417464 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
UPP1-205ENST00000417464 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
UPP1-205ENST00000417464 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
UPP1-205ENST00000417464 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
UPP1-205ENST00000417464 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
UPP1-205ENST00000417464 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
UPP1-205ENST00000417464 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
UPP1-205ENST00000417464 MT1AP04731 61 aa5.84□□□□□ -1.47
UPP1-205ENST00000417464 KRTAP5-7Q6L8G8 165 aa5.79□□□□□ -1.48
UPP1-205ENST00000417464 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
UPP1-205ENST00000417464 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
UPP1-205ENST00000417464 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
UPP1-205ENST00000417464 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.51
UPP1-205ENST00000417464 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
UPP1-205ENST00000417464 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
UPP1-205ENST00000417464 MT3P25713 68 aa5.3□□□□□ -1.56
UPP1-205ENST00000417464 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
UPP1-205ENST00000417464 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
UPP1-205ENST00000417464 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
UPP1-205ENST00000417464 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
UPP1-205ENST00000417464 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
UPP1-205ENST00000417464 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
UPP1-205ENST00000417464 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
UPP1-205ENST00000417464 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
UPP1-205ENST00000417464 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
UPP1-205ENST00000417464 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
UPP1-205ENST00000417464 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
UPP1-205ENST00000417464 KTN1-AS1Q86SY8 53 aa4.65□□□□□ -1.67
UPP1-205ENST00000417464 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
UPP1-205ENST00000417464 SVIPQ8NHG7 77 aa4.63□□□□□ -1.67
UPP1-205ENST00000417464 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
UPP1-205ENST00000417464 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
UPP1-205ENST00000417464 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
UPP1-205ENST00000417464 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
UPP1-205ENST00000417464 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
UPP1-205ENST00000417464 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
UPP1-205ENST00000417464 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
UPP1-205ENST00000417464 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
UPP1-205ENST00000417464 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
UPP1-205ENST00000417464 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
UPP1-205ENST00000417464 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
UPP1-205ENST00000417464 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
UPP1-205ENST00000417464 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
UPP1-205ENST00000417464 H3BS24 57 aa3.25□□□□□ -1.89
UPP1-205ENST00000417464 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
UPP1-205ENST00000417464 PRM1P04553 51 aa3.23□□□□□ -1.89
UPP1-205ENST00000417464 INE1O15225 51 aa2.89□□□□□ -1.95
UPP1-205ENST00000417464 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
UPP1-205ENST00000417464 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 61.3 ms