RNA–Protein interactions for RNA: ENST00000416880.5

SEC22C-204, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-204ENST00000416880 LINC01558Q9Y6Z2 57 aa4.97□□□□□ -1.61
SEC22C-204ENST00000416880 PRR15LQ9BU68 103 aa4.96□□□□□ -1.62
SEC22C-204ENST00000416880 Q1T7F1 81 aa4.95□□□□□ -1.62
SEC22C-204ENST00000416880 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
SEC22C-204ENST00000416880 PSPHP1O15172 72 aa4.87□□□□□ -1.63
SEC22C-204ENST00000416880 TNP1P09430 55 aa4.87□□□□□ -1.63
SEC22C-204ENST00000416880 A8MU10 97 aa4.86□□□□□ -1.63
SEC22C-204ENST00000416880 MT1LQ93083 61 aa4.86□□□□□ -1.63
SEC22C-204ENST00000416880 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
SEC22C-204ENST00000416880 MT1MQ8N339 61 aa4.85□□□□□ -1.63
SEC22C-204ENST00000416880 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
SEC22C-204ENST00000416880 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
SEC22C-204ENST00000416880 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
SEC22C-204ENST00000416880 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
SEC22C-204ENST00000416880 UQCR11O14957 56 aa4.79□□□□□ -1.64
SEC22C-204ENST00000416880 A6NED7 52 aa4.75□□□□□ -1.65
SEC22C-204ENST00000416880 KRTAP9-9Q9BYP9 154 aa4.75□□□□□ -1.65
SEC22C-204ENST00000416880 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
SEC22C-204ENST00000416880 MT4P47944 62 aa4.72□□□□□ -1.65
SEC22C-204ENST00000416880 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
SEC22C-204ENST00000416880 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
SEC22C-204ENST00000416880 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
SEC22C-204ENST00000416880 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
SEC22C-204ENST00000416880 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
SEC22C-204ENST00000416880 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
SEC22C-204ENST00000416880 BRK1Q8WUW1 75 aa4.59□□□□□ -1.67
SEC22C-204ENST00000416880 K7ERS5 55 aa4.58□□□□□ -1.68
SEC22C-204ENST00000416880 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
SEC22C-204ENST00000416880 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
SEC22C-204ENST00000416880 KRTAP4-7Q9BYR0 210 aa4.56□□□□□ -1.68
SEC22C-204ENST00000416880 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
SEC22C-204ENST00000416880 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
SEC22C-204ENST00000416880 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
SEC22C-204ENST00000416880 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
SEC22C-204ENST00000416880 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
SEC22C-204ENST00000416880 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
SEC22C-204ENST00000416880 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
SEC22C-204ENST00000416880 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
SEC22C-204ENST00000416880 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
SEC22C-204ENST00000416880 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
SEC22C-204ENST00000416880 PMAIP1Q13794 54 aa4.34□□□□□ -1.71
SEC22C-204ENST00000416880 ROMO1P60602 79 aa4.31□□□□□ -1.72
SEC22C-204ENST00000416880 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
SEC22C-204ENST00000416880 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
SEC22C-204ENST00000416880 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
SEC22C-204ENST00000416880 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
SEC22C-204ENST00000416880 MT1AP04731 61 aa4.15□□□□□ -1.75
SEC22C-204ENST00000416880 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
SEC22C-204ENST00000416880 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
SEC22C-204ENST00000416880 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
SEC22C-204ENST00000416880 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
SEC22C-204ENST00000416880 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
SEC22C-204ENST00000416880 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
SEC22C-204ENST00000416880 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
SEC22C-204ENST00000416880 MT3P25713 68 aa3.83□□□□□ -1.8
SEC22C-204ENST00000416880 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
SEC22C-204ENST00000416880 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SEC22C-204ENST00000416880 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
SEC22C-204ENST00000416880 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
SEC22C-204ENST00000416880 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
SEC22C-204ENST00000416880 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
SEC22C-204ENST00000416880 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
SEC22C-204ENST00000416880 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
SEC22C-204ENST00000416880 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SEC22C-204ENST00000416880 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
SEC22C-204ENST00000416880 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
SEC22C-204ENST00000416880 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
SEC22C-204ENST00000416880 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
SEC22C-204ENST00000416880 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
SEC22C-204ENST00000416880 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
SEC22C-204ENST00000416880 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
SEC22C-204ENST00000416880 INE1O15225 51 aa2.64□□□□□ -1.99
SEC22C-204ENST00000416880 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
SEC22C-204ENST00000416880 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
SEC22C-204ENST00000416880 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SEC22C-204ENST00000416880 PRM1P04553 51 aa2.23□□□□□ -2.05
SEC22C-204ENST00000416880 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SEC22C-204ENST00000416880 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 47.3 ms